Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1165

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1164: 9532 - Hypothetical Protein, at 552710 to 552960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553391 to 554372 9533 mRNA_1166: 9534 - KOG2533 Permease of the major facilitator superfamily, at 554788 to 557060 9534

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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552,650 + 0.0
552,697 - -0.8
552,701 + -0.4
552,761 + 9532 mRNA_1164 0.20 -0.0
552,777 - 9532 mRNA_1164 0.27 -1.4
552,788 - 9532 mRNA_1164 0.31 0.1
552,789 - 9532 mRNA_1164 0.31 -0.1
552,824 + 9532 mRNA_1164 0.45 0.1
552,848 - 9532 mRNA_1164 0.55 0.6
552,853 + 9532 mRNA_1164 0.57 0.4
553,116 - -0.6
553,137 - 0.6
553,157 + -2.1
553,161 + -1.4
553,270 + -3.4
553,272 - -0.3
553,435 - -1.8
553,528 - 9533 mRNA_1165 0.14 -2.7
553,595 - 9533 mRNA_1165 0.21 0.8
553,726 + 9533 mRNA_1165 0.34 -2.8
553,732 - 9533 mRNA_1165 0.35 0.8
554,014 - 9533 mRNA_1165 0.63 0.1
554,023 - 9533 mRNA_1165 0.64 -0.7
554,278 - -2.0
554,286 + -1.4
554,351 + -0.1
554,544 + -1.9
554,563 - -1.7
554,625 - -0.7
554,710 - -0.1
555,124 + 9534 mRNA_1166 0.15 0.3
555,178 + 9534 mRNA_1166 0.17 -0.8
555,341 + 9534 mRNA_1166 0.24 0.3
555,344 - 9534 mRNA_1166 0.24 0.5