Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_742

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_741: 9109 - K12858 DDX23, PRP28 ATP-dependent RNA helicase DDX23/PRP28, at 1771104 to 1774231 9109 mRNA_742: 9110 - HMMPfam-SPT2 chromatin protein-PF08243,SMART-SPT2 chromatin protein-SM00784, at 1774415 to 1775869 9110 mRNA_743: 9111 - K08493 VTI1 vesicle transport through interaction with t-SNAREs 1, at 1776255 to 1777416 9111

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,774,309 + -0.6
1,774,376 + 0.0
1,774,457 - 1.2
1,774,619 + 9110 mRNA_742 0.14 -0.8
1,774,922 - 9110 mRNA_742 0.35 0.8
1,775,044 - 9110 mRNA_742 0.43 -0.0
1,775,208 - 9110 mRNA_742 0.55 -0.2
1,775,365 + 9110 mRNA_742 0.65 0.4
1,775,502 + 9110 mRNA_742 0.75 -3.1
1,775,891 - 0.7
1,775,895 - -1.9
1,775,915 + 0.3
1,776,053 + 0.9
1,776,055 - -0.7
1,776,063 + 0.2
1,776,063 - 0.1
1,776,395 + 9111 mRNA_743 0.12 -3.2
1,776,745 - 9111 mRNA_743 0.42 0.3
1,776,850 + 9111 mRNA_743 0.51 -2.2