Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_652

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_652: 9020 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 1570188 to 1571223 9020 mRNA_653: 9021 - HMMPfam-RTA1 like protein-PF04479, at 1571518 to 1572791 9021

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,569,464 - -0.1
1,569,567 - 1.1
1,569,572 + -0.7
1,569,579 - 0.2
1,569,589 + 0.3
1,569,606 - -1.8
1,569,623 + -0.4
1,569,704 + 0.9
1,569,727 + -0.7
1,569,729 - -1.0
1,569,729 - -0.5
1,569,731 + 0.4
1,569,733 - -0.8
1,569,734 + 1.8
1,569,736 + 0.7
1,569,736 + -0.4
1,569,738 + 0.4
1,569,740 - -0.1
1,569,745 - 0.2
1,569,748 - 1.1
1,569,749 - -0.0
1,569,753 + 0.2
1,569,754 + -0.3
1,569,754 + 0.8
1,569,754 + 0.7
1,569,755 - -1.2
1,569,755 - 0.7
1,569,755 - 0.6
1,569,755 - -1.0
1,569,756 + 1.0
1,569,758 + -0.9
1,569,774 - 0.3
1,569,814 + -0.3
1,569,851 - -0.6
1,569,851 - 0.2
1,569,852 + 0.4
1,569,868 + -0.8
1,569,880 + 1.3
1,569,887 - -1.2
1,569,901 - 0.0
1,569,901 - 0.9
1,569,901 + -3.4
1,569,909 + -0.3
1,569,913 + -0.5
1,569,922 - 0.0
1,569,949 - -0.2
1,569,970 - 0.2
1,570,009 + 0.4
1,570,019 + -0.0
1,570,108 + 1.0
1,570,139 - 0.6
1,570,147 + -1.0
1,570,148 - -2.2
1,570,292 - 9020 mRNA_652 0.10 -0.5
1,570,298 + 9020 mRNA_652 0.11 1.8
1,570,309 + 9020 mRNA_652 0.12 -2.2
1,570,888 - 9020 mRNA_652 0.68 -1.0
1,570,893 - 9020 mRNA_652 0.68 -1.0
1,571,176 + 0.1
1,571,500 + 3.1
1,571,757 + 9021 mRNA_653 0.19 0.4
1,571,926 - 9021 mRNA_653 0.32 -0.3