Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_503

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_502: 8870 - ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089, at 1193819 to 1194942 8870 mRNA_503: 8871 - Hypothetical Protein, at 1195207 to 1198729 8871 mRNA_504: 8872 - Hypothetical Protein, at 1199527 to 1200402 8872

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,194,256 - 8870 mRNA_502 0.39 -1.0
1,194,301 - 8870 mRNA_502 0.43 0.5
1,194,407 - 8870 mRNA_502 0.52 -1.2
1,194,694 + 8870 mRNA_502 0.78 -2.8
1,194,826 + 8870 mRNA_502 0.90 -0.1
1,194,947 - -0.9
1,194,998 - 0.7
1,195,001 + -0.0
1,195,006 + 0.8
1,195,016 + 0.5
1,195,024 + -0.6
1,195,155 - -0.4
1,195,467 + -0.7
1,195,863 + 8871 mRNA_503 0.19 0.8
1,196,034 - 8871 mRNA_503 0.23 -1.4
1,196,164 - 8871 mRNA_503 0.27 -2.9
1,196,344 + 8871 mRNA_503 0.32 -0.2
1,196,784 - 8871 mRNA_503 0.45 -0.2
1,197,069 - 8871 mRNA_503 0.53 0.2
1,197,070 + 8871 mRNA_503 0.53 1.6
1,197,087 + 8871 mRNA_503 0.53 0.6
1,197,772 - 8871 mRNA_503 0.73 -1.3
1,197,776 - 8871 mRNA_503 0.73 0.4
1,197,802 + 8871 mRNA_503 0.74 0.4
1,197,967 + 8871 mRNA_503 0.78 -0.6
1,198,233 - 8871 mRNA_503 0.86 -0.1
1,198,521 - 1.3
1,198,526 + -1.2
1,198,658 - -0.4
1,198,809 + 2.3
1,198,820 - -1.0
1,198,824 + 1.5
1,198,824 - 1.6
1,198,831 + -0.8
1,198,836 - -0.4
1,198,839 + -0.1
1,198,839 + -1.1
1,198,842 + 0.1
1,198,853 + -1.0
1,198,869 - -1.3
1,198,884 - -0.2
1,198,981 + -0.3
1,198,981 + -0.2
1,198,982 - 0.4
1,198,985 + -0.3
1,198,987 - 0.1
1,198,989 - 0.2
1,198,990 + 0.1
1,198,995 + -1.5
1,198,995 - -1.1
1,198,997 + -0.4
1,199,001 - 0.4
1,199,003 + 0.1
1,199,010 + -0.2
1,199,012 - -0.2
1,199,014 + -1.1
1,199,033 - -1.3
1,199,033 - 0.0
1,199,039 - -2.2
1,199,054 + 0.8
1,199,076 + -0.1
1,199,076 + 0.4
1,199,095 - 0.3
1,199,115 - -1.1
1,199,121 - 1.2
1,199,123 + -1.2
1,199,131 + 0.1
1,199,137 + -2.2
1,199,214 - 0.3
1,199,256 - -1.1
1,199,284 - -0.4
1,199,289 - -0.9
1,199,317 + 0.2
1,199,334 - 0.1
1,199,334 - -2.0
1,199,349 - -0.0
1,199,372 - 1.1
1,199,372 - -0.0
1,199,381 - 1.8
1,199,385 + 0.3
1,199,387 - 0.8
1,199,388 + -1.9
1,199,389 - 1.0
1,199,390 - -2.2
1,199,397 + -1.7
1,199,403 - -1.2
1,199,405 + -0.1
1,199,420 - 0.0
1,199,425 + -1.5
1,199,429 - -0.4
1,199,516 - -0.3
1,199,557 - -0.1
1,199,565 + 0.5
1,199,589 + 0.1
1,199,598 - -0.9
1,199,614 + -0.2
1,199,707 - 8872 mRNA_504 0.21 -0.5