Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_486

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_485: 8853 - K13278 ASPG 60kDa lysophospholipase, at 1154487 to 1156857 8853 mRNA_486: 8854 - HMMPfam-Domain of unknown function (DUF202)-PF02656, at 1157048 to 1157778 8854 mRNA_487: 8855 - HMMPfam-Thioredoxin-PF00085,HMMPfam-PITH domain-PF06201,PRINTS-Thioredoxin family signature-PR00421,ProSitePatterns-Thioredoxin family active site.-PS00194,ProSiteProfiles-Thioredoxin domain profile.-PS51352,ProSiteProfiles-PITH domain profile.-PS51532,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF52833, at 1158062 to 1159223 8855

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,156,295 + 8853 mRNA_485 0.76 -0.3
1,156,479 - 8853 mRNA_485 0.84 -1.2
1,156,601 - 8853 mRNA_485 0.89 1.8
1,156,904 - -2.1
1,156,930 - 0.9
1,156,965 + -1.4
1,157,108 - -4.7
1,157,250 - 8854 mRNA_486 0.28 0.6
1,157,415 - 8854 mRNA_486 0.50 -1.7
1,157,538 - 8854 mRNA_486 0.67 -1.0
1,157,822 + 0.2
1,157,834 + 1.9
1,158,124 + 0.5