Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_445

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_444: 8812 - HMMPfam-Transcription factor IIIC subunit delta N-term-PF12657,HMMPfam-Putative zinc-finger of transcription factor IIIC complex-PF12660,SUPERFAMILY--SSF50978, at 1030821 to 1034414 8812 mRNA_445: 8813 - K03768 PPIB, ppiB peptidyl-prolyl cis-trans isomerase B (cyclophilin B), at 1034694 to 1036039 8813 mRNA_446: 8814 - K00254 DHODH, pyrD dihydroorotate dehydrogenase, at 1036896 to 1038649 8814

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,034,263 - -0.7
1,034,413 - -0.4
1,034,568 - -0.1
1,034,589 - -1.2
1,035,011 - 8813 mRNA_445 0.24 -1.6
1,035,609 - 8813 mRNA_445 0.68 -2.3
1,035,610 - 8813 mRNA_445 0.68 0.8
1,035,841 - 8813 mRNA_445 0.85 0.6
1,035,842 - 8813 mRNA_445 0.85 0.2
1,035,842 + 8813 mRNA_445 0.85 -1.7
1,035,852 + 8813 mRNA_445 0.86 1.2
1,035,868 + 8813 mRNA_445 0.87 -0.7
1,035,874 - 8813 mRNA_445 0.88 -1.0
1,036,023 - -1.0
1,036,161 + -0.2
1,036,178 + -3.5
1,036,192 - -0.2
1,036,325 - 0.5
1,036,334 - 1.1
1,036,627 - 1.6