Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_282

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_281: 8649 - KOG0653 Cyclin B and related kinase-activating proteins, at 669704 to 671491 8649 mRNA_282: 8650 - Hypothetical Protein, at 672440 to 673215 8650 mRNA_283: 8651 - K00872 thrB1 homoserine kinase, at 673914 to 675244 8651

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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671,498 - 0.1
671,498 - 2.0
671,509 - 0.4
671,537 + -0.5
671,561 - 1.6
671,564 + -0.0
671,665 - 0.2
671,674 - -0.1
671,681 + -0.5
671,681 - -1.0
671,694 + 1.4
671,694 + -0.8
671,700 - 0.8
671,704 + -0.4
671,825 + 0.8
671,843 + -0.4
671,845 - -0.1
671,846 - 0.6
671,848 + -2.3
671,850 - -1.1
671,854 + 1.1
671,863 - -0.1
671,866 - 0.4
671,866 + 0.5
671,866 + 0.6
671,867 - -1.4
671,873 + -2.1
671,875 - 0.5
671,875 - 0.8
671,881 + 0.3
671,885 + 0.3
671,886 - 1.1
671,893 - -0.4
671,902 + 0.3
671,920 + -0.0
671,927 + 0.7
671,995 - 1.3
672,003 + -1.9
672,004 - 0.2
672,009 - -1.5
672,018 + -0.6
672,023 - -1.2
672,029 - 0.6
672,029 + 0.5
672,038 - 1.5
672,044 - -0.3
672,044 + -1.2
672,045 + -0.4
672,049 + -0.7
672,058 - 0.4
672,139 - 0.2
672,146 + 0.4
672,164 + -0.6
672,165 - 0.8
672,165 - -0.4
672,169 - 0.5
672,175 - 1.0
672,190 - -0.2
672,276 + -1.1
672,293 - -0.9
672,309 + 2.0
672,320 - -0.1
672,331 + -0.2
672,336 - 0.7
672,357 + -0.2
672,360 + 1.3
672,363 + -0.2
672,372 - 1.0
672,375 + 2.1
672,376 - -0.3
672,379 + -0.3
672,379 + 0.8
672,386 + -1.2
672,395 + 0.3
672,399 + -0.3
672,403 - 0.9
672,430 - -0.3
672,479 + -0.3
672,506 - -0.1
672,529 - 8650 mRNA_282 0.11 -1.6
672,589 + 8650 mRNA_282 0.19 0.6
672,699 + 8650 mRNA_282 0.33 -0.1
672,774 - 8650 mRNA_282 0.43 -1.4
672,799 + 8650 mRNA_282 0.46 0.1
672,799 - 8650 mRNA_282 0.46 -1.1
672,800 + 8650 mRNA_282 0.46 -1.1
672,805 + 8650 mRNA_282 0.47 0.1
672,821 - 8650 mRNA_282 0.49 -0.7
672,824 - 8650 mRNA_282 0.49 0.4
672,827 + 8650 mRNA_282 0.50 -0.1
672,828 + 8650 mRNA_282 0.50 -2.1
672,851 + 8650 mRNA_282 0.53 -0.5
672,876 - 8650 mRNA_282 0.56 -0.1
672,952 - 8650 mRNA_282 0.66 0.8
673,010 + 8650 mRNA_282 0.73 -0.7
673,014 + 8650 mRNA_282 0.74 -0.8
673,059 - 8650 mRNA_282 0.80 0.2
673,165 + 0.0
673,215 + -0.8
673,523 + 0.6
673,882 + -1.5