Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_202

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_201: 8569 - K00294 E1.2.1.88 1-pyrroline-5-carboxylate dehydrogenase, at 492772 to 495021 8569 mRNA_202: 8570 - HMMPfam-Frequency clock protein-PF09421, at 495941 to 499437 8570 mRNA_203: 8571 - SUPERFAMILY--SSF51197, at 499764 to 500298 8571 mRNA_204: 8572 - Hypothetical Protein, at 500316 to 500871 8572

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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495,030 + 0.3
495,125 - -0.0
495,147 - -1.5
495,152 + -0.5
495,155 + 1.2
495,155 - -1.2
495,157 - -2.8
495,159 - 0.5
495,162 + 0.3
495,162 + -0.7
495,168 - -0.3
495,169 - 0.7
495,177 - -1.5
495,179 + 0.1
495,180 - -1.9
495,181 + 0.6
495,181 + 1.0
495,182 + -0.1
495,182 + -1.7
495,183 + 0.8
495,186 - -0.0
495,189 + -1.3
495,192 + -2.8
495,201 - -0.7
495,209 + -0.4
495,247 + -0.2
495,495 - -2.0
495,505 - -0.7
496,356 - 8570 mRNA_202 0.12 0.1
496,374 + 8570 mRNA_202 0.12 0.7
496,508 - 8570 mRNA_202 0.16 -0.0
496,546 - 8570 mRNA_202 0.17 -0.2
496,698 + 8570 mRNA_202 0.22 -0.3
497,018 - 8570 mRNA_202 0.31 -2.2
497,038 - 8570 mRNA_202 0.31 0.1
497,054 - 8570 mRNA_202 0.32 -1.4
497,286 - 8570 mRNA_202 0.38 -0.3
497,481 + 8570 mRNA_202 0.44 -1.1
497,656 + 8570 mRNA_202 0.49 -1.7
497,926 + 8570 mRNA_202 0.57 -1.1
498,047 - 8570 mRNA_202 0.60 -1.7
498,779 + 8570 mRNA_202 0.81 -2.7
498,916 - 8570 mRNA_202 0.85 -2.1
498,939 + 8570 mRNA_202 0.86 -3.1
499,071 - 8570 mRNA_202 0.90 -1.1
499,072 + 8570 mRNA_202 0.90 -0.8
499,074 + 8570 mRNA_202 0.90 -2.8
499,082 - 8570 mRNA_202 0.90 -1.1
499,085 + 8570 mRNA_202 0.90 -2.7
499,186 + -1.4
499,198 + -0.4
499,215 - -0.2
499,221 - -0.5
499,224 - -0.8
499,236 + -0.7
499,238 - -0.1
499,240 + -0.0
499,360 - -0.2
499,369 - -1.6
499,379 + 0.1
499,380 + 0.4
499,382 - 0.7
499,385 + -0.9
499,386 + 0.3
499,500 - -0.9
499,503 + -1.3
499,506 - 0.0
499,516 - 0.3
499,517 - 0.4
499,520 + -0.3
499,523 - -0.1
499,526 + -0.2
499,536 + 1.4
499,538 + 0.4
499,666 - -1.0
499,669 - -1.6
499,813 - -1.4
499,857 + 8571 mRNA_203 0.17 0.4
499,958 + 8571 mRNA_203 0.36 0.4
500,100 + 8571 mRNA_203 0.63 0.4
500,110 + 8571 mRNA_203 0.65 2.1
500,274 - 0.1
500,401 - 8572 mRNA_204 0.15 -0.3
500,425 - 8572 mRNA_204 0.20 0.4