Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7807

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7806: 16174 - Hypothetical Protein, at 1115383 to 1115856 16174 mRNA_7807: 16175 - K01304 pcp pyroglutamyl-peptidase, at 1116309 to 1117210 16175 mRNA_7808: 16176 - K20183 VPS39, VAM6 Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39, at 1117423 to 1121551 16176

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,115,451 - 16174 mRNA_7806 0.14 -0.4
1,115,471 - 16174 mRNA_7806 0.19 -1.0
1,115,745 + 16174 mRNA_7806 0.76 -0.4
1,115,773 + 16174 mRNA_7806 0.82 -0.7
1,115,908 - 3.3
1,115,930 - 0.3
1,116,462 - 16175 mRNA_7807 0.17 -0.0
1,116,512 - 16175 mRNA_7807 0.23 -0.3
1,116,686 - 16175 mRNA_7807 0.42 -0.2
1,116,847 + 16175 mRNA_7807 0.60 -0.1
1,117,090 + 16175 mRNA_7807 0.87 -2.0
1,117,132 + 0.3
1,117,237 - 1.7
1,117,248 + 1.9
1,117,251 - -1.0
1,117,272 + 0.3
1,117,273 + -0.6
1,117,277 + -1.0
1,117,413 - 1.2