Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7700

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7700: 16068 - HMMPfam-14-3-3 protein-PF00244,PRINTS-14-3-3 protein zeta signature-PR00305,ProSitePatterns-14-3-3 proteins signature 1.-PS00796,SMART-14-3-3 homologues-SM00101,SUPERFAMILY--SSF48445, at 874959 to 876595 16068 mRNA_7701: 16069 - SMART-Armadillo/beta-catenin-like repeats-SM00185,SUPERFAMILY--SSF48371, at 877198 to 880311 16069

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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874,543 - -1.2
874,588 - 1.1
874,656 + -0.1
875,064 - -0.3
875,067 - 0.4
875,349 - 16068 mRNA_7700 0.24 0.5
875,447 - 16068 mRNA_7700 0.30 0.3
875,471 + 16068 mRNA_7700 0.31 0.9
875,645 - 16068 mRNA_7700 0.42 1.0
875,757 - 16068 mRNA_7700 0.49 0.5
875,757 - 16068 mRNA_7700 0.49 -0.6
875,901 - 16068 mRNA_7700 0.58 1.1
875,917 + 16068 mRNA_7700 0.59 -1.0
876,064 - 16068 mRNA_7700 0.68 0.4
876,225 + 16068 mRNA_7700 0.77 0.4
876,339 + 16068 mRNA_7700 0.84 0.2
876,481 - 0.3
876,495 + 1.1
876,517 + -0.1
876,524 - 0.8
876,564 - 0.9
876,641 - -1.0
876,661 + -0.6
876,669 + -0.4
876,761 - 0.6
876,809 - 0.4
876,823 + -0.1
876,824 + -0.4
876,839 + 0.5
876,839 + 1.0
876,940 + -1.0
876,942 - -2.5
876,946 - -1.1
876,946 - -0.5
876,948 - -0.0
876,950 - -0.5
876,950 - -1.0
876,951 + -0.2
876,960 - -1.2
876,961 - -0.7
876,994 - -2.4
877,009 + -1.1
877,020 + 0.2
877,035 + -0.4
877,099 + -0.0
877,113 - -3.4
877,121 + -1.0
877,137 + 0.9
877,145 - -0.6
877,151 - -0.9
877,152 + 0.1
877,173 + 0.8
877,249 - -0.0
877,259 + -0.2
877,319 + 0.4
877,379 - -0.3
877,401 + -0.8
877,409 + 0.0
877,415 - 0.4
877,546 + 16069 mRNA_7701 0.11 -0.4