Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7320

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7320: 15688 - BLAST genomic scaffold, msy-sf-7 protein, putative [Rhizoct..., at 106 to 1532 15688 mRNA_7321: 15689 - KOG1339 Aspartyl protease, at 1943 to 3763 15689

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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14 + -0.4
14 + 0.8
14 + 0.3
14 + 0.1
22 + -1.6
29 + 1.1
35 + -1.0
45 + 1.2
66 + 1.5
68 + -0.2
71 - 0.9
105 + -0.8
120 - -1.4
120 + 0.7
121 - 0.5
122 - 0.2
126 + 1.0
126 + -0.2
131 - -0.8
135 - -0.1
135 + -2.7
135 + 0.9
135 + 1.1
135 - -0.6
142 - 0.7
148 + -0.1
153 + -0.3
159 - 1.0
159 - 0.9
161 + -1.8
168 - 0.6
195 + -0.1
233 + 0.2
263 + 15688 mRNA_7320 0.11 -0.2
267 - 15688 mRNA_7320 0.11 -0.9
301 - 15688 mRNA_7320 0.14 0.3
310 - 15688 mRNA_7320 0.14 -0.2
313 + 15688 mRNA_7320 0.15 -0.5
313 + 15688 mRNA_7320 0.15 -0.5
319 + 15688 mRNA_7320 0.15 0.4
322 - 15688 mRNA_7320 0.15 0.9
340 - 15688 mRNA_7320 0.16 0.2
345 + 15688 mRNA_7320 0.17 0.3
357 + 15688 mRNA_7320 0.18 -1.3
359 + 15688 mRNA_7320 0.18 0.1
365 - 15688 mRNA_7320 0.18 -1.0
401 - 15688 mRNA_7320 0.21 0.1
401 - 15688 mRNA_7320 0.21 0.2
401 + 15688 mRNA_7320 0.21 -1.9
405 + 15688 mRNA_7320 0.21 -1.4
415 + 15688 mRNA_7320 0.22 0.5
428 - 15688 mRNA_7320 0.23 -3.4
461 - 15688 mRNA_7320 0.25 0.4
462 + 15688 mRNA_7320 0.25 -0.3
466 - 15688 mRNA_7320 0.25 -1.4
482 + 15688 mRNA_7320 0.26 -1.4
488 - 15688 mRNA_7320 0.27 -1.7
573 - 15688 mRNA_7320 0.33 0.3
594 - 15688 mRNA_7320 0.34 -0.4
595 + 15688 mRNA_7320 0.34 -1.1
595 + 15688 mRNA_7320 0.34 -1.3
625 - 15688 mRNA_7320 0.36 -0.9
644 + 15688 mRNA_7320 0.38 -1.2
644 + 15688 mRNA_7320 0.38 -1.2
648 + 15688 mRNA_7320 0.38 0.5
654 - 15688 mRNA_7320 0.38 0.3
654 + 15688 mRNA_7320 0.38 0.6
713 + 15688 mRNA_7320 0.43 -1.2
753 - 15688 mRNA_7320 0.45 -1.4
756 - 15688 mRNA_7320 0.46 -1.0
763 + 15688 mRNA_7320 0.46 0.3
765 + 15688 mRNA_7320 0.46 0.5
778 + 15688 mRNA_7320 0.47 -0.9
811 - 15688 mRNA_7320 0.49 0.1
921 + 15688 mRNA_7320 0.57 0.8
945 + 15688 mRNA_7320 0.59 0.2
1,059 + 15688 mRNA_7320 0.67 -0.8
1,167 + 15688 mRNA_7320 0.74 -1.2
1,174 + 15688 mRNA_7320 0.75 -0.6
1,182 - 15688 mRNA_7320 0.75 0.6
1,196 + 15688 mRNA_7320 0.76 0.0
1,218 + 15688 mRNA_7320 0.78 -0.4
1,258 + 15688 mRNA_7320 0.81 -2.1
1,326 - 15688 mRNA_7320 0.85 -0.0
1,360 + 15688 mRNA_7320 0.88 0.6
1,366 + 15688 mRNA_7320 0.88 -0.1
1,497 - 0.1
1,518 + -0.1
1,582 + 0.2
1,666 - -0.7
1,675 + 1.0
1,789 - 0.4
1,907 + -0.0
1,929 + -2.3
1,948 + 3.4
2,105 - -0.6
2,297 - 15689 mRNA_7321 0.19 -0.1
2,508 - 15689 mRNA_7321 0.31 0.6
2,521 + 15689 mRNA_7321 0.32 1.8
2,526 + 15689 mRNA_7321 0.32 0.2
2,529 - 15689 mRNA_7321 0.32 -0.2
2,529 - 15689 mRNA_7321 0.32 -0.7