Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7277

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7276: 15644 - K17806 PAM17, TIM23 mitochondrial import inner membrane translocase subunit TIM23, at 1278512 to 1279383 15644 mRNA_7277: 15645 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1279656 to 1282236 15645 mRNA_7278: 15646 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1282472 to 1285388 15646

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,278,750 - 15644 mRNA_7276 0.27 0.2
1,278,764 + 15644 mRNA_7276 0.29 0.8
1,278,880 - 15644 mRNA_7276 0.42 1.3
1,278,881 + 15644 mRNA_7276 0.42 0.7
1,278,902 + 15644 mRNA_7276 0.45 -0.0
1,279,149 - 15644 mRNA_7276 0.73 -0.3
1,279,159 + 15644 mRNA_7276 0.74 -0.8
1,279,279 - 15644 mRNA_7276 0.88 -1.2
1,279,484 - 1.9
1,279,618 - 0.3
1,280,058 - 15645 mRNA_7277 0.16 0.8
1,280,393 - 15645 mRNA_7277 0.29 -0.6
1,280,517 - 15645 mRNA_7277 0.33 -0.0
1,280,563 + 15645 mRNA_7277 0.35 0.5
1,280,959 - 15645 mRNA_7277 0.50 -1.1
1,281,115 - 15645 mRNA_7277 0.57 -2.0
1,281,147 + 15645 mRNA_7277 0.58 0.7
1,281,212 - 15645 mRNA_7277 0.60 0.4
1,281,403 - 15645 mRNA_7277 0.68 -0.5
1,281,412 - 15645 mRNA_7277 0.68 0.8
1,281,504 + 15645 mRNA_7277 0.72 0.3
1,281,526 + 15645 mRNA_7277 0.72 -1.2
1,281,639 - 15645 mRNA_7277 0.77 -0.1
1,281,640 + 15645 mRNA_7277 0.77 1.0
1,281,657 + 15645 mRNA_7277 0.78 -0.9
1,281,693 - 15645 mRNA_7277 0.79 1.1
1,281,819 + 15645 mRNA_7277 0.84 0.5
1,281,830 + 15645 mRNA_7277 0.84 -1.2
1,281,993 - 0.8
1,282,125 + 0.9
1,282,244 - -0.3
1,282,266 - 0.6
1,282,421 - 1.6
1,282,422 - 0.8
1,282,427 + 2.7
1,282,429 - 0.4
1,282,555 + -0.7
1,282,557 - -1.4
1,282,710 + 1.1
1,282,715 - 1.5
1,282,716 - -0.9
1,282,726 + 0.6
1,282,873 - 15646 mRNA_7278 0.14 -0.7
1,282,890 - 15646 mRNA_7278 0.14 0.4
1,282,895 + 15646 mRNA_7278 0.15 0.2
1,283,006 - 15646 mRNA_7278 0.18 1.1
1,283,014 - 15646 mRNA_7278 0.19 -1.4
1,283,177 - 15646 mRNA_7278 0.24 -0.0