Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6613

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6612: 14980 - Hypothetical Protein, at 1243315 to 1245025 14980 mRNA_6613: 14981 - K08740 MSH4 DNA mismatch repair protein MSH4, at 1245585 to 1249013 14981 mRNA_6614: 14982 - HMMPfam-MRC1-like domain-PF09444, at 1249488 to 1254442 14982

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,244,835 - 14980 mRNA_6612 0.89 -0.7
1,244,843 - 14980 mRNA_6612 0.89 -3.1
1,244,847 + 14980 mRNA_6612 0.90 0.9
1,244,984 + -1.1
1,244,985 - -1.6
1,245,000 - -1.9
1,245,131 - -1.0
1,245,149 - -1.1
1,245,164 + -0.7
1,245,284 - -2.4
1,245,427 + -1.1
1,245,438 + -1.1
1,245,440 - -0.7
1,245,452 + -0.2
1,245,734 - -1.8
1,245,759 + 0.0
1,245,847 - -0.3
1,245,858 + -1.7
1,245,995 - 14981 mRNA_6613 0.12 -1.6
1,246,025 - 14981 mRNA_6613 0.13 -1.3
1,246,182 + 14981 mRNA_6613 0.17 -2.4
1,246,182 + 14981 mRNA_6613 0.17 -0.4
1,246,614 + 14981 mRNA_6613 0.30 1.1
1,246,895 - 14981 mRNA_6613 0.38 -0.7
1,247,063 - 14981 mRNA_6613 0.43 -0.4
1,247,082 + 14981 mRNA_6613 0.44 -0.4
1,247,521 + 14981 mRNA_6613 0.56 -0.1
1,247,625 - 14981 mRNA_6613 0.59 -1.8
1,248,544 + 14981 mRNA_6613 0.86 2.5
1,248,657 - 14981 mRNA_6613 0.90 -0.1
1,249,002 + -1.5
1,249,244 - -0.4
1,249,250 + -1.1
1,249,251 - 1.3
1,249,287 - -3.4
1,249,291 - -0.7
1,249,461 + 0.1