Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6539

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6537: 14905 - Hypothetical Protein, at 1025496 to 1027566 14905 mRNA_6538: 14906 - BLAST AGC/AKT protein kinase [Microbotryum lychnidis-dioica..., at 1027896 to 1028222 14906 mRNA_6539: 14907 - K19800 SCH9 serine/threonine protein kinase SCH9, at 1028539 to 1031379 14907 mRNA_6540: 14908 - K00838 ARO8 aromatic amino acid aminotransferase I, at 1031966 to 1033668 14908

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,027,665 + 0.0
1,027,688 - -0.5
1,027,690 + 0.6
1,027,690 - -0.4
1,027,690 + -0.1
1,027,697 + -0.4
1,027,710 + -0.7
1,027,710 + -0.6
1,027,842 - -0.7
1,027,850 + -2.2
1,027,855 + -0.0
1,027,860 - -3.3
1,028,000 + 14906 mRNA_6538 0.32 -3.5
1,028,008 - 14906 mRNA_6538 0.34 -1.7
1,028,009 + 14906 mRNA_6538 0.35 -3.1
1,028,031 + 14906 mRNA_6538 0.41 -4.5
1,028,033 + 14906 mRNA_6538 0.42 -2.5
1,028,140 + 14906 mRNA_6538 0.75 -0.4
1,028,148 + 14906 mRNA_6538 0.77 -2.2
1,028,154 + 14906 mRNA_6538 0.79 -1.0
1,028,159 - 14906 mRNA_6538 0.80 -2.6
1,028,179 - 14906 mRNA_6538 0.87 -2.5
1,028,297 - -1.2
1,028,300 - -1.9
1,028,307 + -4.1
1,028,311 + -1.6
1,028,312 + -0.2
1,028,313 + -2.2
1,028,486 + -1.7
1,028,598 + -2.1
1,029,002 - 14907 mRNA_6539 0.16 -1.6
1,029,313 - 14907 mRNA_6539 0.27 -4.1
1,029,817 + 14907 mRNA_6539 0.45 -1.9
1,029,916 + 14907 mRNA_6539 0.48 -2.6
1,030,105 + 14907 mRNA_6539 0.55 -3.2
1,030,181 - 14907 mRNA_6539 0.58 -3.7
1,030,587 + 14907 mRNA_6539 0.72 -4.9
1,030,629 + 14907 mRNA_6539 0.74 -3.7
1,030,670 - 14907 mRNA_6539 0.75 -3.5
1,030,671 + 14907 mRNA_6539 0.75 -4.2
1,030,784 + 14907 mRNA_6539 0.79 -0.9
1,031,098 + -4.3
1,031,200 + -2.9
1,031,200 - -2.2
1,031,826 + -2.4