Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6325

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6324: 14692 - Hypothetical Protein, at 549404 to 551693 14692 mRNA_6325: 14693 - Hypothetical Protein, at 552273 to 554258 14693 mRNA_6326: 14694 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 554507 to 555774 14694

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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551,505 - 2.4
551,681 - -1.6
551,780 - 0.8
551,787 - 0.9
551,787 - -0.5
551,792 + 0.4
551,808 - 0.9
551,823 - -1.2
551,827 - -0.4
551,832 - 0.0
551,837 + 0.2
551,838 - 0.6
551,841 - -2.1
551,842 + -0.9
551,846 + 0.5
551,997 + 0.8
552,126 + -2.7
552,132 + -1.0
552,438 - -0.1
552,875 - 14693 mRNA_6325 0.30 -0.5
553,039 + 14693 mRNA_6325 0.39 1.4
553,163 - 14693 mRNA_6325 0.45 0.6
553,166 + 14693 mRNA_6325 0.45 1.2
553,305 + 14693 mRNA_6325 0.52 -0.8
553,325 - 14693 mRNA_6325 0.53 0.6
553,351 + 14693 mRNA_6325 0.54 0.3
553,438 - 14693 mRNA_6325 0.59 1.3
553,456 - 14693 mRNA_6325 0.60 -0.9
553,457 - 14693 mRNA_6325 0.60 -1.8
553,460 + 14693 mRNA_6325 0.60 -0.9
553,464 + 14693 mRNA_6325 0.60 1.0
553,477 - 14693 mRNA_6325 0.61 0.2
553,479 - 14693 mRNA_6325 0.61 -1.6
553,480 + 14693 mRNA_6325 0.61 0.9
553,522 - 14693 mRNA_6325 0.63 -1.1
553,545 - 14693 mRNA_6325 0.64 0.4
553,546 + 14693 mRNA_6325 0.64 -2.3
553,546 + 14693 mRNA_6325 0.64 0.5
553,546 - 14693 mRNA_6325 0.64 -0.4
553,548 - 14693 mRNA_6325 0.64 -1.4
553,560 + 14693 mRNA_6325 0.65 0.8
553,582 + 14693 mRNA_6325 0.66 -0.6
553,587 - 14693 mRNA_6325 0.66 1.4
553,592 - 14693 mRNA_6325 0.66 -0.7
553,595 - 14693 mRNA_6325 0.67 -2.9
553,614 - 14693 mRNA_6325 0.68 -1.1
553,623 + 14693 mRNA_6325 0.68 -1.6
553,623 + 14693 mRNA_6325 0.68 -1.0
553,629 - 14693 mRNA_6325 0.68 -1.5
553,632 + 14693 mRNA_6325 0.68 -0.5
553,634 - 14693 mRNA_6325 0.69 -0.2
553,647 - 14693 mRNA_6325 0.69 0.5
553,652 + 14693 mRNA_6325 0.69 -0.3
553,653 + 14693 mRNA_6325 0.69 0.1
553,657 + 14693 mRNA_6325 0.70 -0.8
553,661 + 14693 mRNA_6325 0.70 0.4
553,670 + 14693 mRNA_6325 0.70 -0.2
553,673 - 14693 mRNA_6325 0.70 0.2
553,673 + 14693 mRNA_6325 0.70 -0.3
553,687 + 14693 mRNA_6325 0.71 -1.1
553,711 + 14693 mRNA_6325 0.72 -0.8
553,728 + 14693 mRNA_6325 0.73 -1.6
553,730 + 14693 mRNA_6325 0.73 0.5
553,740 + 14693 mRNA_6325 0.74 -1.4
553,762 + 14693 mRNA_6325 0.75 -2.0
553,768 - 14693 mRNA_6325 0.75 -2.3
553,774 - 14693 mRNA_6325 0.76 2.5
553,778 + 14693 mRNA_6325 0.76 -0.7
553,779 - 14693 mRNA_6325 0.76 -0.6
553,785 - 14693 mRNA_6325 0.76 -0.9
553,786 + 14693 mRNA_6325 0.76 -1.1
553,786 + 14693 mRNA_6325 0.76 -0.7
553,791 + 14693 mRNA_6325 0.76 0.9
553,851 - 14693 mRNA_6325 0.79 -0.1
553,866 - 14693 mRNA_6325 0.80 -1.2
553,878 - 14693 mRNA_6325 0.81 -0.6
553,895 - 14693 mRNA_6325 0.82 -0.3
553,923 + 14693 mRNA_6325 0.83 0.4
553,934 - 14693 mRNA_6325 0.84 -0.9
553,945 - 14693 mRNA_6325 0.84 -0.2
553,963 - 14693 mRNA_6325 0.85 -1.3
553,978 + 14693 mRNA_6325 0.86 0.2
554,030 + 14693 mRNA_6325 0.88 0.2
554,050 + 14693 mRNA_6325 0.89 -1.9
554,055 - 14693 mRNA_6325 0.90 -2.7
554,061 + -0.0
554,072 + -1.8
554,080 + 0.4
554,087 - -2.1
554,105 + -2.0
554,211 + 0.2
554,306 + -0.5
554,331 + 0.0
554,350 - -2.6
554,368 - -1.0
554,369 + 0.4
554,378 + -0.7
554,494 - 0.1
554,502 - 0.4
554,511 + -0.5
554,517 - -0.6