Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5906

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5905: 14273 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 1212592 to 1214577 14273 mRNA_5906: 14274 - KOG2568 Predicted membrane protein, at 1214923 to 1217024 14274 mRNA_5907: 14275 - K02726 PSMA2 20S proteasome subunit alpha 2, at 1217461 to 1218756 14275

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,214,140 - 14273 mRNA_5905 0.78 -0.6
1,214,172 - 14273 mRNA_5905 0.80 -0.7
1,214,292 - 14273 mRNA_5905 0.86 -0.2
1,214,436 + -0.1
1,214,574 + -0.6
1,214,730 + -0.2
1,214,736 + -1.6
1,214,749 - -0.3
1,215,033 - -0.3
1,215,058 - -1.2
1,215,187 - 14274 mRNA_5906 0.13 0.4
1,215,193 - 14274 mRNA_5906 0.13 -0.4
1,215,322 - 14274 mRNA_5906 0.19 -0.3
1,215,364 - 14274 mRNA_5906 0.21 -0.4
1,215,625 - 14274 mRNA_5906 0.33 -3.2
1,215,625 + 14274 mRNA_5906 0.33 0.0
1,215,654 - 14274 mRNA_5906 0.35 1.1
1,215,775 + 14274 mRNA_5906 0.41 0.8
1,215,798 + 14274 mRNA_5906 0.42 0.1
1,215,924 + 14274 mRNA_5906 0.48 0.7
1,215,943 - 14274 mRNA_5906 0.49 -1.3
1,216,524 - 14274 mRNA_5906 0.76 -0.5
1,216,684 - 14274 mRNA_5906 0.84 -1.4
1,216,964 + -0.0
1,217,095 + 0.1
1,217,096 + 0.0
1,217,107 - 0.1
1,217,111 + 0.2
1,217,115 - -0.5
1,217,117 + 0.5
1,217,129 + 0.9
1,217,238 - -0.0
1,217,244 + 0.0
1,217,246 + -1.0
1,217,249 + 0.6
1,217,249 - 1.7
1,217,257 + 0.3
1,217,259 + 0.2
1,217,273 - 1.9
1,217,366 - 1.3
1,217,389 - 1.5