Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5833

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5832: 14200 - K02863 RP-L1, MRPL1, rplA large subunit ribosomal protein L1, at 1045581 to 1047659 14200 mRNA_5833: 14201 - K09705 K09705 uncharacterized protein, at 1047761 to 1048668 14201 mRNA_5834: 14202 - HMMPfam-Protein of unknown function (DUF1688)-PF07958, at 1048946 to 1050486 14202

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,047,878 - 14201 mRNA_5833 0.13 1.5
1,048,201 - 14201 mRNA_5833 0.48 -1.8
1,048,396 + 14201 mRNA_5833 0.70 -0.0
1,048,429 - 14201 mRNA_5833 0.74 -3.3
1,048,431 + 14201 mRNA_5833 0.74 0.4
1,048,442 + 14201 mRNA_5833 0.75 -0.1
1,048,512 + 14201 mRNA_5833 0.83 0.4
1,048,537 - 14201 mRNA_5833 0.85 -2.7
1,048,539 + 14201 mRNA_5833 0.86 -2.7
1,048,554 - 14201 mRNA_5833 0.87 -1.3
1,048,739 + 0.2
1,048,748 + 0.3
1,048,774 - -1.2
1,048,875 - 0.3
1,048,943 - -1.3
1,048,995 - -0.4
1,049,020 - -1.2
1,049,027 + 0.2
1,049,034 + -0.4
1,049,466 - 14202 mRNA_5834 0.34 0.1