Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5738

Experiments: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814354 to 815055 14105 mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815382 to 817330 14106 mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818147 to 820488 14107

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
814,648 - 14105 mRNA_5737 0.42 -1.2
814,785 - 14105 mRNA_5737 0.61 -1.5
814,951 - 14105 mRNA_5737 0.85 -3.2
815,116 + -0.3
815,144 - 0.3
815,592 - 14106 mRNA_5738 0.11 -1.9
816,303 - 14106 mRNA_5738 0.47 1.0
817,293 - -1.3
817,439 - -0.6
817,441 + -0.1
817,449 - -1.6
817,455 + -0.9
817,470 + -0.4
817,603 - 0.3
817,604 - 2.0
817,613 + 0.1
817,619 - -0.0
817,621 + -1.0
817,785 + -1.6
817,879 - 0.9
817,882 - -0.5
817,886 + 0.5
817,894 + -0.1
817,909 + -0.7
817,909 - 0.0
817,913 - 0.6
817,914 + -0.4
817,917 + -0.3
817,925 + -0.2
818,033 + -0.3
818,044 - -1.6
818,050 - -0.1
818,051 - -0.3
818,052 + -0.3
818,053 + -0.5
818,055 + -0.1
818,065 - -0.3
818,081 + 0.2
818,083 - -1.0