Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5541

Experiments: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5540: 13908 - Interpro GDP-fucose protein O-fucosyltransferase, at 330944 to 333027 13908 mRNA_5541: 13909 - K02482 K02482 two-component system, NtrC family, sensor kinase, at 333432 to 336799 13909 mRNA_5542: 13910 - Hypothetical Protein, at 336976 to 338321 13910

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
332,811 + 13908 mRNA_5540 0.90 -1.6
332,923 + 0.1
332,978 + 0.0
333,094 - 0.9
333,219 + -0.3
333,222 + 1.4
333,255 + -0.8
333,261 - 0.3
333,261 - -0.5
333,271 - 0.2
333,279 + 1.5
333,335 + -0.5
333,339 - 1.7
333,343 - -0.4
333,352 - -1.0
333,355 - -1.5
333,356 + 0.7
333,361 + 0.4
333,361 - -1.8
333,362 + -2.0
333,372 + -0.1
333,379 - -1.5
333,383 + -0.9
333,405 - -1.8
333,407 + 0.4
333,443 - -1.7
333,485 - -0.1
333,542 + -0.4
333,575 - -0.4
333,580 - 0.9
333,683 - -1.3
333,699 + 0.3
333,853 - 13909 mRNA_5541 0.12 -0.1
334,432 - 13909 mRNA_5541 0.30 -0.4
334,585 + 13909 mRNA_5541 0.34 0.4
334,861 + 13909 mRNA_5541 0.42 0.9
335,002 - 13909 mRNA_5541 0.47 -0.3
335,524 + 13909 mRNA_5541 0.62 -0.5
335,685 + 13909 mRNA_5541 0.67 -0.7
335,794 - 13909 mRNA_5541 0.70 -3.3
335,924 + 13909 mRNA_5541 0.74 -1.3
335,951 + 13909 mRNA_5541 0.75 -0.5
335,996 - 13909 mRNA_5541 0.76 0.5
336,027 - 13909 mRNA_5541 0.77 -1.9
336,279 - 13909 mRNA_5541 0.85 -0.0
336,469 - 1.4
336,621 - -1.2
336,625 + -1.4
336,705 + -0.1
337,012 - -0.4
337,205 - 13910 mRNA_5542 0.17 0.0
337,213 + 13910 mRNA_5542 0.18 -0.6
337,320 - 13910 mRNA_5542 0.26 -0.5
337,354 - 13910 mRNA_5542 0.28 -0.2
337,501 - 13910 mRNA_5542 0.39 -0.3
337,508 + 13910 mRNA_5542 0.40 -0.5