Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5332

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5331: 13699 - SUPERFAMILY--SSF52047, at 473951 to 475290 13699 mRNA_5332: 13700 - K01904 4CL 4-coumarate--CoA ligase, at 475424 to 477955 13700 mRNA_5333: 13701 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 478191 to 479250 13701

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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474,460 + 13699 mRNA_5331 0.38 -2.5
474,565 - 13699 mRNA_5331 0.46 -0.1
474,752 - 13699 mRNA_5331 0.60 2.1
474,773 + 13699 mRNA_5331 0.61 0.3
475,027 - 13699 mRNA_5331 0.80 0.1
475,044 + 13699 mRNA_5331 0.82 0.8
475,166 + -1.0
475,288 - -1.5
475,360 - -0.4
475,363 - -0.3
475,383 + 0.1
475,392 + -0.4
475,399 - 0.4
475,404 + -0.4
475,530 + -0.6
475,546 + 0.5
475,679 - 13700 mRNA_5332 0.10 -0.2
476,090 - 13700 mRNA_5332 0.26 0.6
476,133 + 13700 mRNA_5332 0.28 0.3
476,134 - 13700 mRNA_5332 0.28 -0.8
476,400 + 13700 mRNA_5332 0.39 -1.5
476,411 + 13700 mRNA_5332 0.39 1.0
476,656 + 13700 mRNA_5332 0.49 -0.5
477,115 - 13700 mRNA_5332 0.67 -0.0
477,269 - 13700 mRNA_5332 0.73 0.1
477,299 + 13700 mRNA_5332 0.74 -0.1
477,388 + 13700 mRNA_5332 0.78 1.1
477,431 - 13700 mRNA_5332 0.79 -0.7
477,687 - 13700 mRNA_5332 0.89 -1.7
477,945 + 2.2
478,546 - 13701 mRNA_5333 0.33 -0.2
478,557 - 13701 mRNA_5333 0.35 -0.1
478,564 + 13701 mRNA_5333 0.35 0.3
478,870 - 13701 mRNA_5333 0.64 -0.0
478,897 - 13701 mRNA_5333 0.67 -0.5
478,904 + 13701 mRNA_5333 0.67 0.8