Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5231

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5230: 13598 - K17906 ATG2 autophagy-related protein 2, at 209416 to 215994 13598 mRNA_5231: 13599 - Hypothetical Protein, at 216501 to 218178 13599 mRNA_5232: 13600 - SUPERFAMILY--SSF52047, at 218691 to 220745 13600

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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215,573 + -3.2
215,649 + -3.8
215,652 - -2.9
215,807 + -2.3
215,920 + -2.2
215,947 + -1.4
215,952 - -1.1
215,976 + -1.2
216,104 - -1.7
216,216 - 0.8
216,296 + -1.2
216,375 - 0.6
216,378 + 0.4
216,423 + -0.1
216,429 - -0.2
216,579 + -0.0
216,673 + 13599 mRNA_5231 0.10 -0.5
216,705 - 13599 mRNA_5231 0.12 -0.4
216,812 + 13599 mRNA_5231 0.19 -1.6
217,099 - 13599 mRNA_5231 0.36 -0.7
217,264 - 13599 mRNA_5231 0.45 -1.9
217,278 - 13599 mRNA_5231 0.46 -0.4
217,425 - 13599 mRNA_5231 0.55 0.0
217,716 - 13599 mRNA_5231 0.72 -2.3
217,723 - 13599 mRNA_5231 0.73 -0.1
217,739 + 13599 mRNA_5231 0.74 -1.8
217,845 - 13599 mRNA_5231 0.80 0.0
217,861 - 13599 mRNA_5231 0.81 -0.6
217,877 + 13599 mRNA_5231 0.82 0.2
217,896 - 13599 mRNA_5231 0.83 -0.2
218,022 - -0.5
218,024 + -0.4
218,030 - 0.7
218,030 - 0.5
218,031 - -0.3
218,045 - -1.0
218,046 + 0.6
218,054 - -3.7
218,054 - 1.0
218,055 + -1.0
218,055 + -0.3
218,059 + 0.1
218,062 - -0.9
218,063 - 0.1
218,064 + -0.7
218,066 - -0.3
218,068 + -0.0
218,072 - 0.3
218,074 + 0.2
218,074 - 0.1
218,080 + 0.1
218,093 + -0.7
218,096 + 0.4
218,099 - -1.8
218,105 - -0.3
218,120 + -0.8
218,128 - -0.4
218,133 - -3.1
218,142 - 0.6
218,147 + 0.4
218,158 - 1.6
218,160 + -0.3
218,160 + 0.8
218,162 + -0.1
218,164 + -0.2
218,165 + -0.6
218,165 - 0.6
218,166 + -1.0
218,218 - 1.3
218,220 - 0.9
218,245 + 0.1
218,247 + 0.3
218,263 + 0.6
218,294 + 0.4
218,295 - -1.3
218,324 - -1.4
218,328 - -0.0
218,334 - 0.2
218,334 + 0.4
218,337 - -0.4
218,338 - -1.0
218,339 + -1.8
218,341 + -1.0
218,411 + 0.7
218,411 + -1.1
218,505 - 0.6
218,510 - -0.6
218,641 + -1.9
218,658 - -0.4
218,659 - -2.0
218,659 + 1.1
218,933 + 13600 mRNA_5232 0.12 -1.9
218,936 + 13600 mRNA_5232 0.12 -1.0
218,937 - 13600 mRNA_5232 0.12 -1.7
219,076 + 13600 mRNA_5232 0.19 -2.7
219,080 - 13600 mRNA_5232 0.19 -1.2