Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5195

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5194: 13562 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 122774 to 124635 13562 mRNA_5195: 13563 - KOG0814 Glyoxylase, at 125333 to 126456 13563 mRNA_5196: 13564 - K17218 sqr sulfide-quinone oxidoreductase, at 126891 to 128997 13564

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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124,511 - -0.1
124,556 - 0.2
124,583 - 1.0
124,586 - -4.1
124,591 - 0.7
124,616 + -0.5
124,624 - -0.1
124,645 + -1.0
124,732 - -1.1
124,773 + -1.1
124,775 + -0.6
124,775 + 0.4
124,776 - -1.5
124,781 + -0.2
124,784 - 0.9
124,788 + -1.7
124,798 + 0.9
124,798 + 1.8
124,801 - -1.1
124,803 + -1.0
124,805 - -0.3
124,807 + 0.5
124,812 + -0.5
124,896 + -1.4
124,927 + -0.9
124,941 - -0.4
124,961 - -1.0
124,963 + 1.0
124,968 - 0.5
124,968 + 1.5
124,968 + -0.2
124,970 - -1.6
124,972 + -1.0
124,975 + 0.4
124,983 + -0.6
124,984 + 0.6
125,005 - -0.7
125,016 + -1.4
125,040 - -0.6
125,043 - -0.2
125,050 + 0.2
125,223 + -0.1
125,227 + 0.6
125,665 + 13563 mRNA_5195 0.30 -3.2
125,668 + 13563 mRNA_5195 0.30 -2.0
125,816 - 13563 mRNA_5195 0.43 -1.1
125,816 + 13563 mRNA_5195 0.43 -2.5
125,957 - 13563 mRNA_5195 0.56 -0.8
126,343 + 13563 mRNA_5195 0.90 -3.6
126,364 + -2.5
126,411 - -2.6
126,498 - -5.3
126,511 + -3.8
126,518 - 0.2
126,524 - -1.8
126,532 + -3.4
126,540 + -5.0
126,540 + -2.1
126,668 + -1.0
126,684 - -0.1
126,695 + -0.1
126,697 + 0.3
126,704 + -1.0
126,711 - -1.2
126,810 - 0.4
126,816 - 0.9
126,817 + -2.0
126,839 + -1.2
126,924 + 0.5
127,006 + 0.9
127,171 + 13564 mRNA_5196 0.13 -0.2
127,303 + 13564 mRNA_5196 0.20 -0.5
127,305 - 13564 mRNA_5196 0.20 1.2
127,430 + 13564 mRNA_5196 0.26 2.5
127,443 + 13564 mRNA_5196 0.26 1.5
127,443 - 13564 mRNA_5196 0.26 0.2