Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5099

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5098: 13466 - K08065 NFYB nuclear transcription Y subunit beta, at 1747637 to 1748369 13466 mRNA_5099: 13467 - Hypothetical Protein, at 1749217 to 1750028 13467 mRNA_5100: 13468 - Hypothetical Protein, at 1750173 to 1750911 13468

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,748,335 - -1.1
1,748,345 - -0.2
1,748,346 + 0.4
1,748,372 - -0.4
1,748,375 + -1.7
1,748,463 - -1.7
1,748,479 - -1.5
1,748,480 - -1.6
1,748,480 + 0.7
1,748,489 + -1.3
1,748,489 + -0.2
1,748,522 - -2.3
1,748,575 - -0.6
1,748,639 - -0.7
1,748,644 + -1.5
1,748,668 + -1.5
1,748,676 - -0.3
1,748,681 - -0.2
1,748,686 + 0.6
1,748,686 + -0.3
1,748,687 - -0.2
1,748,688 - -0.3
1,748,693 - 0.7
1,748,694 - -1.1
1,748,700 - -0.7
1,748,701 + 0.9
1,748,706 + -0.9
1,748,744 + 0.9
1,748,744 + 0.4
1,748,760 + -0.5
1,748,786 + -1.2
1,748,788 + -1.1
1,748,791 + -0.2
1,748,792 - 1.1
1,748,806 - 0.4
1,748,823 + 0.6
1,748,827 - -1.1
1,748,830 - 0.8
1,748,837 + -1.5
1,748,846 + -2.3
1,748,854 + 0.6
1,748,855 + 0.3
1,748,858 - 0.5
1,748,861 - -0.8
1,748,862 - 1.0
1,748,863 + 0.2
1,748,863 - -2.1
1,748,893 - 0.0
1,748,922 - -3.4
1,748,929 - 0.0
1,748,991 - -1.3
1,749,000 - -3.9
1,749,001 + -4.0
1,749,028 + 0.8
1,749,051 + 0.0
1,749,095 - -0.6
1,749,098 + -0.4
1,749,115 + -0.8
1,749,124 - 0.7
1,749,124 - 0.7
1,749,145 - -1.1
1,749,146 + -1.9
1,749,271 + 0.9
1,749,440 + 13467 mRNA_5099 0.27 0.4
1,749,594 + 13467 mRNA_5099 0.46 -2.1
1,749,596 - 13467 mRNA_5099 0.47 -0.0
1,749,610 + 13467 mRNA_5099 0.48 0.2
1,749,617 + 13467 mRNA_5099 0.49 0.2
1,749,688 - 13467 mRNA_5099 0.58 0.1
1,749,851 - 13467 mRNA_5099 0.78 0.2
1,749,863 + 13467 mRNA_5099 0.80 0.4
1,749,883 - 13467 mRNA_5099 0.82 0.2
1,750,163 + -1.0
1,750,257 - 13468 mRNA_5100 0.11 -2.1
1,750,435 + 13468 mRNA_5100 0.35 -0.1
1,750,517 + 13468 mRNA_5100 0.47 0.3
1,750,570 + 13468 mRNA_5100 0.54 -1.7
1,750,627 - 13468 mRNA_5100 0.61 -2.0
1,750,703 + 13468 mRNA_5100 0.72 -0.6
1,750,796 - 13468 mRNA_5100 0.84 -0.0
1,750,919 - -1.5
1,750,941 - 1.0
1,750,963 - -0.7
1,751,000 + 0.4
1,751,001 + -3.2
1,751,002 - -1.0
1,751,003 + -1.3
1,751,003 + 0.2
1,751,004 - -2.3