Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4490

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4489: 12857 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 302712 to 304024 12857 mRNA_4490: 12858 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 304461 to 305865 12858 mRNA_4491: 12859 - Hypothetical Protein, at 306091 to 307232 12859

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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303,480 - 12857 mRNA_4489 0.58 -0.9
303,490 - 12857 mRNA_4489 0.59 -0.9
303,781 - 12857 mRNA_4489 0.81 -0.8
303,796 + 12857 mRNA_4489 0.83 -0.2
303,924 - -1.4
303,937 - -0.4
304,081 - 1.3
304,083 + 1.2
304,112 + -0.4
304,112 + -0.1
304,122 + -0.6
304,123 - 1.0
304,174 - -1.0
304,196 - -1.2
304,234 + -0.9
304,271 + 0.7
304,316 - -0.4
304,338 + 0.6
304,668 - 12858 mRNA_4490 0.15 0.1
304,947 + 12858 mRNA_4490 0.35 -0.2
305,112 + 12858 mRNA_4490 0.46 -2.1
305,263 - 12858 mRNA_4490 0.57 -0.0
305,325 - 12858 mRNA_4490 0.61 -4.2
305,721 + 12858 mRNA_4490 0.90 0.5
305,904 - 2.0
306,298 + 12859 mRNA_4491 0.18 -0.9
306,548 - 12859 mRNA_4491 0.40 1.0
306,586 + 12859 mRNA_4491 0.43 -0.4
306,765 + 12859 mRNA_4491 0.59 -1.9
306,812 + 12859 mRNA_4491 0.63 1.0