Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4459

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4458: 12826 - K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein), at 233111 to 233901 12826 mRNA_4459: 12827 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 234229 to 236969 12827 mRNA_4460: 12828 - SUPERFAMILY--SSF52047, at 237623 to 238720 12828

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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233,981 + -0.3
234,123 - -2.1
234,425 + -0.9
234,439 + 0.4
234,460 - 0.4
234,842 + 12827 mRNA_4459 0.22 -1.9
234,898 - 12827 mRNA_4459 0.24 -1.4
235,600 + 12827 mRNA_4459 0.50 0.5
236,084 + 12827 mRNA_4459 0.68 0.8
236,205 + 12827 mRNA_4459 0.72 -1.3
236,248 - 12827 mRNA_4459 0.74 -0.1
236,285 - 12827 mRNA_4459 0.75 0.8
236,343 - 12827 mRNA_4459 0.77 -1.6
236,488 - 12827 mRNA_4459 0.82 0.3
236,509 + 12827 mRNA_4459 0.83 0.3
236,529 + 12827 mRNA_4459 0.84 1.0
236,530 - 12827 mRNA_4459 0.84 -2.1
236,644 - 12827 mRNA_4459 0.88 -0.0
236,646 + 12827 mRNA_4459 0.88 -1.8
236,679 - 12827 mRNA_4459 0.89 -0.1
236,682 - 12827 mRNA_4459 0.89 0.1
236,762 + -0.4
236,797 + -0.8
236,799 + 0.1
236,892 - 1.6
236,929 + -0.0
236,933 - -0.3
236,939 - -0.3
236,971 - 2.3
237,027 - -0.0
237,040 + 0.3
237,114 + 1.7
237,236 - -1.3
237,353 - -0.2
237,394 - -0.7
237,406 + -0.6
237,426 + -0.3
237,562 + -0.2
237,582 + -1.1
237,585 - -0.7
237,629 + -0.1
237,800 + 12828 mRNA_4460 0.16 1.5