Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4457

Experiments: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4456: 12824 - BLAST C-x8-C-x5-C-x3-H type zinc finger protein [Nanniz..., at 228673 to 230476 12824 mRNA_4457: 12825 - K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3, at 231158 to 232825 12825 mRNA_4458: 12826 - K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein), at 233111 to 233901 12826

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
230,217 + 12824 mRNA_4456 0.86 -1.3
230,227 + 12824 mRNA_4456 0.86 -0.1
230,485 - -0.5
230,501 + 1.3
230,512 - -1.3
230,533 - -2.1
230,621 + -0.7
230,627 - 0.5
230,742 - -2.3
230,767 - 2.3
230,769 - 0.2
230,769 + 0.2
230,873 + -0.1
230,881 + -1.3
230,881 - 1.7
230,881 + -1.7
230,889 - -0.4
230,897 - -0.9
230,910 + -0.5
230,919 - -0.8
230,920 - -1.6
230,956 - -0.7
230,966 - 0.3
230,966 + -0.9
230,970 - -1.0
230,974 - -0.9
230,982 - 0.2
230,995 - -0.6
231,009 - -0.8
231,012 - 0.0
231,031 + -0.1
231,061 + -1.7
231,275 + -1.0
231,402 + 12825 mRNA_4457 0.15 -1.8
231,865 - 12825 mRNA_4457 0.42 -1.3
232,098 - 12825 mRNA_4457 0.56 0.9
232,222 - 12825 mRNA_4457 0.64 1.3
232,445 - 12825 mRNA_4457 0.77 0.3
232,698 + -0.6
232,828 + -1.7
232,855 + -0.4
232,960 + -0.6
233,103 - 0.4