Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4342

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4341: 12709 - K08266 MLST8, GBL target of rapamycin complex subunit LST8, at 1949173 to 1951155 12709 mRNA_4342: 12710 - K08801 PASK PAS domain containing serine/threonine kinase, at 1951654 to 1955244 12710 mRNA_4343: 12711 - K15206 TFC7 transcription factor C subunit 7, at 1955743 to 1957166 12711

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,951,205 - -1.7
1,951,214 + -0.6
1,951,226 - 0.0
1,951,348 + -0.7
1,951,357 - -1.1
1,951,379 - -0.9
1,951,515 - -0.2
1,951,518 + -1.9
1,951,659 - -1.2
1,951,661 + 0.7
1,951,793 - -0.0
1,951,911 + -0.5
1,951,943 - -0.1
1,951,964 - -0.4
1,952,058 - 12710 mRNA_4342 0.11 -2.0
1,952,404 - 12710 mRNA_4342 0.21 -0.5
1,952,537 - 12710 mRNA_4342 0.25 -0.4
1,952,689 - 12710 mRNA_4342 0.29 -0.2
1,952,987 - 12710 mRNA_4342 0.37 -0.4
1,952,987 - 12710 mRNA_4342 0.37 0.3
1,953,147 - 12710 mRNA_4342 0.42 0.5
1,953,298 - 12710 mRNA_4342 0.46 -1.5
1,953,310 + 12710 mRNA_4342 0.46 0.7
1,953,310 + 12710 mRNA_4342 0.46 -0.2
1,953,408 + 12710 mRNA_4342 0.49 -0.7
1,953,555 + 12710 mRNA_4342 0.53 -0.2
1,954,122 + 12710 mRNA_4342 0.69 -3.7
1,954,144 + 12710 mRNA_4342 0.69 -0.4
1,954,288 + 12710 mRNA_4342 0.73 -0.5
1,954,301 - 12710 mRNA_4342 0.74 -3.0
1,955,005 + -0.5
1,955,006 - 0.7
1,955,035 + 0.2
1,955,160 - 0.3
1,955,166 + -0.2
1,955,306 - -1.2
1,955,320 + -1.3
1,955,337 - -0.5
1,955,366 + 0.5
1,955,464 + 1.1
1,955,481 + -0.6
1,955,488 + -0.3
1,955,621 + -0.1
1,955,636 - -1.6
1,955,730 + -1.0
1,955,765 - -1.7
1,956,190 + 12711 mRNA_4343 0.31 -2.7