Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4231

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4230: 12598 - KOG1659 Class 2 transcription repressor NC2, alpha subunit (DRAP1), at 1668742 to 1669106 12598 mRNA_4231: 12599 - KOG4476 Gluconate transport-inducing protein, at 1669682 to 1672278 12599

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,669,095 + -1.3
1,669,382 - -1.2
1,669,567 + -2.1
1,669,847 + -2.1
1,669,935 + -0.8
1,670,339 - 12599 mRNA_4231 0.25 -1.0
1,670,475 + 12599 mRNA_4231 0.31 -0.1
1,670,744 - 12599 mRNA_4231 0.41 -0.3
1,670,761 + 12599 mRNA_4231 0.42 -0.5
1,670,895 + 12599 mRNA_4231 0.47 0.4
1,670,896 + 12599 mRNA_4231 0.47 -1.0
1,671,065 + 12599 mRNA_4231 0.53 -0.3
1,671,090 - 12599 mRNA_4231 0.54 0.7
1,671,101 + 12599 mRNA_4231 0.55 -0.4
1,671,171 + 12599 mRNA_4231 0.57 -0.7
1,671,382 - 12599 mRNA_4231 0.65 -1.1
1,671,637 + 12599 mRNA_4231 0.75 -3.5
1,671,660 - 12599 mRNA_4231 0.76 -0.1
1,671,789 - 12599 mRNA_4231 0.81 0.0
1,671,913 - 12599 mRNA_4231 0.86 -0.0
1,671,917 - 12599 mRNA_4231 0.86 0.3
1,672,041 - -1.8
1,672,509 - -0.0
1,672,513 + 0.4
1,672,660 - -0.1
1,672,685 + 0.1
1,672,685 + -0.0
1,672,685 + 0.6
1,672,688 + -1.6
1,672,700 + -1.5
1,672,770 - 0.6
1,672,808 - 0.4
1,672,823 - -1.8
1,672,832 - 0.7
1,672,834 + -0.9
1,672,856 + 0.7
1,672,859 - -0.2
1,672,890 + -0.6
1,672,893 - 1.1
1,672,912 - -0.1
1,672,954 - -1.7
1,672,955 + -0.4
1,672,986 - 0.6
1,672,998 + -1.2
1,673,041 - -0.5
1,673,109 + -1.8
1,673,118 + 0.2
1,673,127 + -1.0
1,673,154 + -0.3
1,673,162 - -0.9
1,673,167 - 0.6
1,673,173 + -2.0
1,673,173 + -2.1
1,673,193 - -0.2
1,673,199 - 0.6
1,673,200 + 0.4
1,673,212 - -0.4
1,673,213 + 0.1
1,673,213 + -1.1
1,673,225 - 0.9
1,673,242 - 0.4
1,673,256 - 0.4
1,673,258 + 0.4
1,673,262 - -1.5
1,673,267 + -0.1
1,673,277 + -0.7