Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4111

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4110: 12478 - BLAST metal resistance protein ycf1 [Trichosporon asahii va..., at 1375596 to 1376142 12478 mRNA_4111: 12479 - K20296 ANG2, VPS51 vacuolar protein sorting-associated protein 51, at 1376562 to 1377671 12479 mRNA_4112: 12480 - HMMPfam-Mannosyltransferase putative-PF11051,SUPERFAMILY--SSF53448, at 1378043 to 1379698 12480

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,376,002 - 12478 mRNA_4110 0.74 0.1
1,376,145 - -0.4
1,376,335 - -0.5
1,376,468 + 1.0
1,376,469 + 0.4
1,376,472 + -2.4
1,376,477 + -0.4
1,376,485 - -0.1
1,376,490 - 0.3
1,376,493 - 0.0
1,376,499 - 0.6
1,376,499 + 0.0
1,376,509 - -2.8
1,376,795 - 12479 mRNA_4111 0.21 0.5
1,376,810 - 12479 mRNA_4111 0.22 -1.1
1,377,057 - 12479 mRNA_4111 0.45 0.4
1,377,228 - 12479 mRNA_4111 0.60 -0.9
1,377,528 + 12479 mRNA_4111 0.87 0.7
1,377,679 + 0.9
1,377,799 + -0.9
1,377,814 - -2.1
1,377,816 + -1.0
1,377,816 + -0.8
1,377,817 + -1.5
1,377,822 - 0.8
1,377,825 + -0.4
1,377,834 - -2.9
1,377,839 + -0.8
1,377,843 - 0.4
1,377,859 + 0.2
1,377,981 - -0.7
1,377,994 + -0.2
1,378,023 + -0.6
1,378,118 + 0.6
1,378,288 + 12480 mRNA_4112 0.15 -1.5
1,378,288 + 12480 mRNA_4112 0.15 -0.0
1,378,310 - 12480 mRNA_4112 0.16 -1.7
1,378,447 + 12480 mRNA_4112 0.24 -0.8
1,378,544 - 12480 mRNA_4112 0.30 -0.4
1,378,581 - 12480 mRNA_4112 0.32 -2.4
1,378,598 + 12480 mRNA_4112 0.34 -1.7
1,378,601 + 12480 mRNA_4112 0.34 -0.5