Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3853

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3852: 12220 - HMMPfam-Glutathione S-transferase, C-terminal domain-PF00043,HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF47616,SUPERFAMILY--SSF52833, at 744290 to 745525 12220 mRNA_3853: 12221 - K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other, at 746204 to 748742 12221 mRNA_3854: 12222 - Hypothetical Protein, at 749490 to 750342 12222

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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745,279 - 12220 mRNA_3852 0.80 -0.7
745,296 + 12220 mRNA_3852 0.81 -0.9
745,420 - -0.4
745,423 - -0.2
745,538 + -1.3
745,664 + 2.4
745,896 + -0.6
746,470 + 12221 mRNA_3853 0.10 0.4
746,697 - 12221 mRNA_3853 0.19 1.0
746,768 + 12221 mRNA_3853 0.22 0.6
746,847 + 12221 mRNA_3853 0.25 -1.7
746,899 + 12221 mRNA_3853 0.27 -0.6
747,036 + 12221 mRNA_3853 0.33 -0.3
747,285 + 12221 mRNA_3853 0.43 0.2
747,750 - 12221 mRNA_3853 0.61 -1.4
748,050 - 12221 mRNA_3853 0.73 -1.3
748,215 + 12221 mRNA_3853 0.79 -2.7
748,220 + 12221 mRNA_3853 0.79 -0.7
748,648 - 0.3
748,650 + 1.2
748,657 + 0.3
748,782 - -0.7
748,800 + -1.7
748,810 - -1.2
748,814 - 0.9
748,831 + 0.0
748,912 + -0.7
748,914 + 1.3
748,915 - -0.6
748,931 + 0.9
748,935 + 1.9
748,936 - -0.1
748,937 + 0.1
748,939 - -0.0
748,948 + -0.0
748,953 - 0.9
748,976 - -1.7
748,982 + -2.0
748,991 + -0.9
748,998 - 1.0
749,044 + -0.5
749,048 - -0.0
749,057 - -0.1
749,058 - -0.6
749,063 - -0.5
749,068 + -0.6
749,071 + -0.5
749,072 + 0.5
749,089 - -0.2
749,096 + -1.0
749,098 - -0.1
749,225 + -0.2
749,227 - -0.3
749,243 - -0.1
749,251 - -0.1
749,258 - -0.8
749,259 + -2.4
749,263 + 1.9
749,266 + -1.2
749,268 - 0.0
749,283 + 0.1
749,364 - -0.1
749,373 - -2.3
749,374 + -1.9
749,379 + -0.1
749,388 - 0.3
749,392 + -1.2
749,393 - -0.1
749,395 + -0.8
749,402 + -0.5
749,402 + -0.5
749,409 + -0.1
749,416 - -0.4
749,422 + 1.7
749,423 + -2.5
749,425 - 0.2
749,425 + -0.0
749,538 + -1.3
749,583 - 12222 mRNA_3854 0.11 -1.0
749,588 - 12222 mRNA_3854 0.11 -1.4
749,661 - 12222 mRNA_3854 0.20 -1.4