Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3680

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3679: 12047 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 326327 to 327835 12047 mRNA_3680: 12048 - Hypothetical Protein, at 328001 to 330038 12048 mRNA_3681: 12049 - Hypothetical Protein, at 330178 to 331991 12049

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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327,068 + 12047 mRNA_3679 0.49 -2.3
327,069 - 12047 mRNA_3679 0.49 -0.9
327,082 + 12047 mRNA_3679 0.50 0.6
327,183 - 12047 mRNA_3679 0.57 -2.3
327,201 + 12047 mRNA_3679 0.58 -0.6
327,319 + 12047 mRNA_3679 0.66 1.6
327,325 + 12047 mRNA_3679 0.66 1.1
327,609 - 12047 mRNA_3679 0.85 0.3
327,622 - 12047 mRNA_3679 0.86 -1.1
327,623 - 12047 mRNA_3679 0.86 1.0
327,628 - 12047 mRNA_3679 0.86 0.3
327,650 + 12047 mRNA_3679 0.88 0.5
327,653 - 12047 mRNA_3679 0.88 0.6
327,656 + 12047 mRNA_3679 0.88 -3.0
327,768 - -0.6
327,772 - -1.3
327,788 + 1.5
327,788 + 0.0
327,913 - -0.7
327,925 - -1.5
327,938 - 0.5
328,125 + -2.3
328,655 - 12048 mRNA_3680 0.32 -0.4
328,659 + 12048 mRNA_3680 0.32 -1.0
328,943 - 12048 mRNA_3680 0.46 0.2
329,859 - 0.8
330,375 - 12049 mRNA_3681 0.11 -1.6
330,382 + 12049 mRNA_3681 0.11 -0.7