Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3557

Experiments: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3556: 11924 - KOG0254 Predicted transporter (major facilitator superfamily), at 38444 to 40817 11924 mRNA_3557: 11925 - K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase, at 41446 to 43898 11925 mRNA_3558: 11926 - K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10, at 44062 to 47314 11926

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
40,937 + 0.4
40,974 + 0.5
41,079 - 0.4
41,080 - -2.3
41,082 - -1.0
41,084 + -1.3
41,224 + -0.4
41,226 - 0.3
41,227 + -0.6
41,234 + -0.0
41,242 + 0.2
41,261 - -1.7
41,369 - -0.9
41,371 - 0.2
41,391 - 0.1
41,396 + -0.2
41,405 + -2.9
41,564 - -0.6
41,678 - -1.7
41,692 - 11925 mRNA_3557 0.10 0.2
41,692 + 11925 mRNA_3557 0.10 -0.6
41,827 + 11925 mRNA_3557 0.16 -1.9
41,842 + 11925 mRNA_3557 0.16 -2.4
42,011 - 11925 mRNA_3557 0.23 0.7
42,580 + 11925 mRNA_3557 0.46 0.3
42,690 - 11925 mRNA_3557 0.51 -2.2
42,696 + 11925 mRNA_3557 0.51 -1.8
42,864 - 11925 mRNA_3557 0.58 -1.8
43,028 - 11925 mRNA_3557 0.64 0.9
43,320 - 11925 mRNA_3557 0.76 -2.1
43,869 - -1.6
43,894 - -0.7
43,895 + -0.2
44,664 - 11926 mRNA_3558 0.19 0.1