Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3422

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3421: 11789 - K14297 NUP98, ADAR2, NUP116 nuclear pore complex protein Nup98-Nup96, at 58356 to 61690 11789 mRNA_3422: 11790 - KOG2882 p-Nitrophenyl phosphatase, at 61810 to 63146 11790 mRNA_3423: 11791 - KOG3655 Drebrins and related actin binding proteins, at 63597 to 64502 11791

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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61,858 - 0.1
62,086 - 11790 mRNA_3422 0.21 0.4
62,428 - 11790 mRNA_3422 0.46 -1.8
62,436 + 11790 mRNA_3422 0.47 -0.5
63,005 - 11790 mRNA_3422 0.89 -1.9
63,137 + -0.1
63,138 - 1.9
63,157 + -1.0
63,158 - -0.7
63,168 + -0.5
63,168 + -2.1
63,304 + -0.1
63,306 - 0.2
63,616 - 0.4
63,620 + -0.4
63,760 - 11791 mRNA_3423 0.18 -0.4
64,023 - 11791 mRNA_3423 0.47 -2.1
64,032 - 11791 mRNA_3423 0.48 -0.7
64,082 + 11791 mRNA_3423 0.54 -0.5