Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3307

Experiments: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3306: 11674 - KOG0845 Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116), at 353822 to 355437 11674 mRNA_3307: 11675 - K06268 PPP3R, CNB serine/threonine-protein phosphatase 2B regulatory subunit, at 355687 to 356880 11675 mRNA_3308: 11676 - KOG2533 Permease of the major facilitator superfamily, at 357667 to 359935 11676

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
355,462 + 0.5
355,602 - -0.6
355,776 + 1.2
355,894 + 11675 mRNA_3307 0.17 0.1
356,031 + 11675 mRNA_3307 0.29 -0.2
356,031 + 11675 mRNA_3307 0.29 1.5
356,052 + 11675 mRNA_3307 0.31 -1.9
356,310 + 11675 mRNA_3307 0.52 -0.9
356,615 - 11675 mRNA_3307 0.78 0.5
356,621 - 11675 mRNA_3307 0.78 2.0
356,623 - 11675 mRNA_3307 0.78 0.5
356,629 - 11675 mRNA_3307 0.79 0.2
356,755 - 11675 mRNA_3307 0.89 1.0
356,888 - 1.2
356,897 - 0.6
356,904 - 0.9
356,914 + 0.6
356,915 - 2.1
357,040 + -0.9
357,044 - -0.2
357,074 + 0.5
357,192 + 0.5
357,196 - -0.0
357,204 + -1.7
357,343 - 0.3
357,790 + -0.1