Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3237

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3236: 11604 - K01755 argH, ASL argininosuccinate lyase, at 173698 to 175795 11604 mRNA_3237: 11605 - K10357 MYO5 myosin V, at 176488 to 184590 11605 mRNA_3238: 11606 - BLAST RNA replication protein [Rhizoctonia solani], at 184726 to 188428 11606

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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175,721 - -3.9
175,861 - 0.1
176,024 - 1.0
176,050 + 0.3
176,179 - -0.5
176,189 - 0.7
176,190 + -0.9
176,192 + -0.0
176,192 + -1.7
176,195 + 0.8
176,198 - 1.0
176,203 + 0.8
176,209 - 0.0
176,216 - 1.7
176,319 + -1.3
176,327 + 0.6
176,329 - -0.3
176,329 - -0.3
176,335 + -2.0
176,343 + -0.1
176,345 + -0.8
176,346 - 1.0
176,347 - 2.0
176,348 + 0.1
176,350 + -2.8
176,351 - -0.8
176,361 + -0.1
176,371 + -0.3
176,379 + -0.5
176,502 - 2.0
176,510 - 0.3
176,579 - -1.8
176,615 - 0.2
176,643 + -0.7
177,108 + -0.1
177,378 - 11605 mRNA_3237 0.11 -0.9
177,417 + 11605 mRNA_3237 0.11 1.0
177,532 + 11605 mRNA_3237 0.13 0.4
177,642 + 11605 mRNA_3237 0.14 -0.5
177,650 - 11605 mRNA_3237 0.14 1.1
178,762 + 11605 mRNA_3237 0.28 1.2
178,933 + 11605 mRNA_3237 0.30 -0.7
178,941 + 11605 mRNA_3237 0.30 1.1
179,003 - 11605 mRNA_3237 0.31 0.3
179,481 + 11605 mRNA_3237 0.37 -0.9
179,868 - 11605 mRNA_3237 0.42 0.1
179,951 + 11605 mRNA_3237 0.43 -1.1
180,518 - 11605 mRNA_3237 0.50 -1.3
180,524 + 11605 mRNA_3237 0.50 -0.0
180,575 - 11605 mRNA_3237 0.50 3.0
181,225 - 11605 mRNA_3237 0.58 0.3
181,372 + 11605 mRNA_3237 0.60 -0.9
181,528 - 11605 mRNA_3237 0.62 -0.0
181,796 + 11605 mRNA_3237 0.66 -0.8
182,306 - 11605 mRNA_3237 0.72 -2.9
182,393 + 11605 mRNA_3237 0.73 0.6
182,412 + 11605 mRNA_3237 0.73 -1.6
182,547 + 11605 mRNA_3237 0.75 0.9
182,665 + 11605 mRNA_3237 0.76 -3.2
182,675 + 11605 mRNA_3237 0.76 -0.0
182,686 - 11605 mRNA_3237 0.76 -0.0
182,699 - 11605 mRNA_3237 0.77 -0.2
182,724 - 11605 mRNA_3237 0.77 -0.5
182,740 + 11605 mRNA_3237 0.77 0.3
182,740 + 11605 mRNA_3237 0.77 -0.2
182,769 - 11605 mRNA_3237 0.78 0.6
182,772 - 11605 mRNA_3237 0.78 -0.3
182,796 - 11605 mRNA_3237 0.78 -1.5
182,893 - 11605 mRNA_3237 0.79 0.3
182,895 - 11605 mRNA_3237 0.79 1.9
182,904 + 11605 mRNA_3237 0.79 -0.9
183,038 + 11605 mRNA_3237 0.81 -0.3
183,056 - 11605 mRNA_3237 0.81 -0.3
183,318 - 11605 mRNA_3237 0.84 -0.4
183,873 - 1.3
184,060 + -2.4
184,071 - 0.3
184,499 - -0.2
184,501 + -0.2
184,503 + -1.3
184,538 + 3.2
184,766 - 0.1
184,777 + -1.4
184,797 + 1.5
184,834 - 0.2
184,931 + -2.5
184,949 + 0.6
185,051 + -0.8
185,414 - 11606 mRNA_3238 0.19 0.1
185,529 + 11606 mRNA_3238 0.22 -0.2
185,540 + 11606 mRNA_3238 0.22 -0.3
185,547 + 11606 mRNA_3238 0.22 -0.5