Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2869

Experiments: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2868: 11236 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 405461 to 407348 11236 mRNA_2869: 11237 - KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes, at 407863 to 408924 11237 mRNA_2870: 11238 - SUPERFAMILY--SSF64182, at 409148 to 410896 11238

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
406,975 + 11236 mRNA_2868 0.80 1.8
407,110 - 11236 mRNA_2868 0.87 -0.7
407,142 - 11236 mRNA_2868 0.89 -0.7
407,248 + 0.8
407,253 + -1.3
407,253 + -0.6
407,254 - -0.4
407,269 + 0.1
407,409 - -1.3
407,419 + -0.7
407,434 + 0.1
407,458 + 0.6
407,480 - 0.3
407,482 - 0.4
407,498 - -1.2
407,505 + 0.4
407,537 - 1.2
407,538 - 0.1
407,546 + -1.6
407,549 - 0.8
407,552 - 0.2
407,552 - 0.9
407,552 - 0.4
407,557 + -1.1
407,558 + -1.7
407,570 - 0.3
407,574 - -1.0
407,693 - 0.6
407,699 - -0.6
407,701 + 0.7
407,715 + -1.8
407,718 + 1.6
407,720 + 0.5
407,736 + 0.2
407,840 - -0.7
407,840 - 0.5
407,844 - 1.0
407,844 - -0.8
407,849 + 0.7
407,859 - 1.1
407,864 + 0.0
407,865 - -0.2
407,868 - 0.2
407,877 - 0.4
408,144 + 11237 mRNA_2869 0.26 0.3
408,442 - 11237 mRNA_2869 0.55 -2.6
408,449 + 11237 mRNA_2869 0.55 0.5
408,641 + 11237 mRNA_2869 0.73 -0.3
408,893 + -0.8
408,899 + -1.0
409,171 + 0.9
409,549 + 11238 mRNA_2870 0.23 -0.4