Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2553

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2552: 10920 - Hypothetical Protein, at 428082 to 428710 10920 mRNA_2553: 10921 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 428822 to 431100 10921 mRNA_2554: 10922 - BLAST Amino acid/polyamine transporter I [Sporothrix insect..., at 431704 to 432671 10922

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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428,026 + -0.6
428,040 + 0.0
428,086 + -0.8
428,105 - -1.2
428,121 - -1.2
428,237 - 10920 mRNA_2552 0.25 2.0
428,265 + 10920 mRNA_2552 0.29 -0.3
428,265 - 10920 mRNA_2552 0.29 0.3
428,384 - 10920 mRNA_2552 0.48 0.0
428,437 + 10920 mRNA_2552 0.56 -0.3
428,553 + 10920 mRNA_2552 0.75 0.5
428,567 + 10920 mRNA_2552 0.77 1.2
428,821 + 0.9
429,016 - 1.4
429,264 - 10921 mRNA_2553 0.19 0.1
429,270 - 10921 mRNA_2553 0.20 -1.9
429,319 - 10921 mRNA_2553 0.22 0.3
429,520 - 10921 mRNA_2553 0.31 0.8
429,577 - 10921 mRNA_2553 0.33 -1.2
429,824 - 10921 mRNA_2553 0.44 -0.2
429,942 - 10921 mRNA_2553 0.49 -0.7
429,979 + 10921 mRNA_2553 0.51 0.8
429,985 + 10921 mRNA_2553 0.51 0.0
430,163 + 10921 mRNA_2553 0.59 0.3
430,294 + 10921 mRNA_2553 0.65 -1.7
430,678 + 10921 mRNA_2553 0.81 0.6
430,765 - 10921 mRNA_2553 0.85 -2.3
430,814 - 10921 mRNA_2553 0.87 -0.9
430,833 + 10921 mRNA_2553 0.88 -0.3
430,918 - -0.1
431,305 - -0.2
431,314 + 0.3
431,333 + 0.0
431,338 - -0.2
431,613 - -0.8
431,777 - 1.3