Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2424

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2423: 10791 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 86088 to 89055 10791 mRNA_2424: 10792 - KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation), at 89637 to 90963 10792 mRNA_2425: 10793 - K02732 PSMB1 20S proteasome subunit beta 6, at 91083 to 92591 10793

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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88,681 - 10791 mRNA_2423 0.87 -0.7
88,830 + -0.9
88,997 - 0.2
89,118 - -0.4
89,132 - -1.9
89,162 - 0.8
89,172 + 0.9
89,173 + 0.5
89,183 + -1.4
89,429 + -0.4
89,593 + -1.4
89,614 - -2.1
90,049 - 10792 mRNA_2424 0.31 0.6
90,346 - 10792 mRNA_2424 0.53 -0.2
90,434 + 10792 mRNA_2424 0.60 0.7
90,461 - 10792 mRNA_2424 0.62 0.0
90,551 - 10792 mRNA_2424 0.69 0.1