Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2338

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2337: 10705 - BLAST general substrate transporter [Wallemia mellicola..., at 656119 to 656520 10705 mRNA_2338: 10706 - K05545 DUS4 tRNA-dihydrouridine synthase 4, at 657491 to 659083 10706 mRNA_2339: 10707 - SUPERFAMILY--SSF55298, at 659249 to 660620 10707

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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656,589 + -2.5
656,589 - -1.1
656,591 - 0.1
656,606 + -0.9
656,612 + -1.0
656,626 + -0.6
656,629 - -1.8
656,629 + -0.3
656,637 - 0.3
656,663 + -0.1
656,672 + -0.6
656,672 - -1.1
656,679 - -0.4
656,682 + -1.6
656,688 + -1.6
656,724 + -0.7
656,742 + 1.6
656,755 - -2.9
656,778 - 0.5
656,791 - -1.4
656,816 - 0.2
656,816 - 1.2
656,832 + -0.5
656,856 - 1.5
656,890 - 0.1
656,899 - -2.1
656,901 - 2.3
656,921 - 0.9
656,923 - -1.5
656,923 - 1.7
656,925 - -0.2
656,930 - -0.9
656,945 + -1.9
656,960 + 0.6
656,960 - -0.6
656,961 + 0.3
656,978 + 0.2
656,978 - 0.1
656,980 - -0.5
656,987 - -0.0
656,990 + 0.7
656,992 - -0.4
656,997 - 0.2
657,029 - -1.2
657,039 + -1.2
657,067 - 0.2
657,077 + -0.3
657,085 + -1.6
657,088 - 1.1
657,123 - 0.7
657,132 + 0.4
657,157 + -0.1
657,164 + -2.4
657,165 - 0.0
657,174 - -1.1
657,175 + -2.7
657,183 + -1.0
657,191 - 0.3
657,204 + 0.0
657,216 - 0.9
657,227 + -0.4
657,234 - -1.7
657,243 - -0.9
657,244 - -0.2
657,246 - -2.1
657,257 + -0.7
657,260 - -2.2
657,265 + -0.3
657,270 - 0.4
657,284 + -1.2
657,292 + 0.0
657,292 + -0.2
657,299 + -0.6
657,308 + 0.4
657,318 + -0.3
657,324 + -2.5
657,325 - -1.1
657,335 + 0.1
657,335 - -0.4
657,421 - -0.7
657,438 - 0.6
657,451 - -2.1
657,463 + 1.6
657,463 + -0.9
657,467 + -3.3
657,584 - -1.2
657,590 - -1.4
657,637 + -0.5
657,641 - -0.1
657,733 - 10706 mRNA_2338 0.15 0.1
657,789 - 10706 mRNA_2338 0.19 -0.0
659,217 - 1.0
659,711 + 10707 mRNA_2339 0.34 -1.5