Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2292

Experiments: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2291: 10659 - HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 540927 to 542780 10659 mRNA_2292: 10660 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 543301 to 545980 10660 mRNA_2293: 10661 - BLAST splicing arginine serine-rich 12 [Moesziomyces an..., at 546142 to 547358 10661

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
542,671 + 0.4
542,699 + -2.1
542,811 + -0.9
542,816 - 0.1
542,823 - -0.7
542,829 + -0.4
542,829 + -0.6
542,982 - 0.3
543,041 + 0.3
543,189 - -0.1
543,199 + 0.6
543,307 - -0.0
543,310 - 0.5
543,351 + -0.7
543,414 + 0.5
543,507 + -1.4
543,625 + 10660 mRNA_2292 0.12 -1.0
543,667 + 10660 mRNA_2292 0.14 -0.3
543,876 - 10660 mRNA_2292 0.21 -0.2
543,907 + 10660 mRNA_2292 0.23 -0.3
544,077 - 10660 mRNA_2292 0.29 -0.3
544,219 + 10660 mRNA_2292 0.34 0.2
544,642 - 10660 mRNA_2292 0.50 1.9
544,645 + 10660 mRNA_2292 0.50 -0.5
544,673 + 10660 mRNA_2292 0.51 -0.5
544,778 - 10660 mRNA_2292 0.55 -0.0
544,862 - 10660 mRNA_2292 0.58 -0.4
544,935 - 10660 mRNA_2292 0.61 0.5
546,205 + -0.3
546,286 + 10661 mRNA_2293 0.12 1.5
546,565 + 10661 mRNA_2293 0.35 0.7
546,599 - 10661 mRNA_2293 0.38 0.7
546,853 + 10661 mRNA_2293 0.58 0.1