Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2017

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2016: 10384 - HMMPfam-Glycosyl transferase family group 2-PF13632,SUPERFAMILY--SSF53448, at 748205 to 751738 10384 mRNA_2017: 10385 - K12600 SKI3, TTC37 superkiller protein 3, at 752495 to 757859 10385 mRNA_2018: 10386 - K09554 CDC37 cell division cycle protein 37, at 758563 to 760344 10386

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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751,596 + -0.2
751,605 + -0.5
751,657 - 1.1
751,683 - -0.2
751,785 + 0.7
751,962 - 0.4
752,039 - 0.6
752,134 + -0.4
752,208 - 0.1
752,333 + 1.0
752,351 - 0.1
752,371 - 1.4
752,533 + -3.3
752,558 - -0.9
752,621 - -3.3
752,704 + -1.8
752,729 + -3.6
752,820 - -1.6
752,823 - -2.3
753,529 - 10385 mRNA_2017 0.19 -0.1
754,120 + 10385 mRNA_2017 0.30 -2.4
755,345 - 10385 mRNA_2017 0.53 -1.8
755,454 - 10385 mRNA_2017 0.55 -1.1
755,720 + 10385 mRNA_2017 0.60 -1.0
755,844 - 10385 mRNA_2017 0.62 -2.9
756,220 - 10385 mRNA_2017 0.69 -0.2
756,227 + 10385 mRNA_2017 0.70 -0.1
757,759 + -0.8
757,816 - -3.7
757,879 + -0.4
757,883 - -3.9
757,911 + -0.8
758,042 - -1.4
758,055 + -0.1
758,187 + -2.1
758,196 + 0.8
758,205 - 1.8
758,214 + -2.0
758,335 - 0.5