Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2001

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2000: 10368 - K09650 PARL, PSARL, PCP1 rhomboid-like protein, at 707641 to 708923 10368 mRNA_2001: 10369 - Hypothetical Protein, at 709037 to 710403 10369

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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708,062 - 10368 mRNA_2000 0.33 -0.6
708,079 - 10368 mRNA_2000 0.34 0.1
708,213 + 10368 mRNA_2000 0.45 0.8
708,247 + 10368 mRNA_2000 0.47 -0.6
708,508 + 10368 mRNA_2000 0.68 0.2
708,514 + 10368 mRNA_2000 0.68 0.1
708,615 - 10368 mRNA_2000 0.76 0.4
708,638 + 10368 mRNA_2000 0.78 0.7
708,650 - 10368 mRNA_2000 0.79 -1.2
708,654 - 10368 mRNA_2000 0.79 0.7
708,662 - 10368 mRNA_2000 0.80 1.0
708,812 + -0.9
708,828 + 1.2
708,830 + -2.0
708,947 - 0.2
708,968 + -0.1
708,984 + 0.2
709,074 - 1.7
709,098 + 1.6
709,113 - 1.1
709,115 + 0.2
709,117 - 0.4
709,123 - -0.9
709,394 - 10369 mRNA_2001 0.26 -1.3
710,099 - 10369 mRNA_2001 0.78 0.3
710,272 - -1.3
710,872 + 0.2
711,168 - -1.2
711,168 - 0.8
711,328 + -0.4