Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1960

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1959: 10327 - Hypothetical Protein, at 613200 to 613373 10327 mRNA_1960: 10328 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 613593 to 615935 10328 mRNA_1961: 10329 - HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140, at 616368 to 617254 10329

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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612,645 - -0.8
612,667 - -2.7
612,806 + -0.6
612,821 + 0.5
613,127 + 0.4
613,434 - 0.3
613,443 + -0.8
613,762 + -0.6
614,007 - 10328 mRNA_1960 0.18 -0.5
614,067 - 10328 mRNA_1960 0.20 0.5
614,201 - 10328 mRNA_1960 0.26 0.3
614,213 + 10328 mRNA_1960 0.26 0.2
614,475 - 10328 mRNA_1960 0.38 0.2
615,228 - 10328 mRNA_1960 0.70 0.1
615,343 + 10328 mRNA_1960 0.75 -1.4
615,546 - 10328 mRNA_1960 0.83 -1.7
615,671 + 10328 mRNA_1960 0.89 -0.8
615,691 + 10328 mRNA_1960 0.90 0.7
615,973 + 0.2
616,087 - -0.6
616,101 + -1.4
616,108 + 0.4
616,379 + 0.3
616,380 - 1.2
616,383 - -2.2
616,389 - -0.2
616,398 - 0.4
616,406 + 0.4
616,433 - 1.7
616,532 + 10329 mRNA_1961 0.18 0.8
616,691 - 10329 mRNA_1961 0.36 0.2