Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1842

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1841: 10209 - KOG4476 Gluconate transport-inducing protein, at 342756 to 344236 10209 mRNA_1842: 10210 - K08660 CNDP2 cytosolic nonspecific dipeptidase, at 344816 to 347199 10210 mRNA_1843: 10211 - Hypothetical Protein, at 347522 to 353659 10211

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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344,164 - -0.5
344,262 - 1.2
344,331 - -0.8
344,560 - -0.0
344,567 + -2.8
344,583 - -1.1
344,590 - -0.2
344,610 - 1.1
344,643 - -0.3
344,653 + -1.8
344,691 + 0.3
344,693 - -1.5
344,704 + 0.4
344,704 - 0.1
344,727 + 0.1
344,748 + -0.3
344,863 - -0.2
345,015 + -1.6
345,034 - 0.0
345,303 + 10210 mRNA_1842 0.20 -2.4
345,453 - 10210 mRNA_1842 0.27 0.5
345,470 + 10210 mRNA_1842 0.27 -0.3
345,757 - 10210 mRNA_1842 0.39 -0.1
345,773 + 10210 mRNA_1842 0.40 -1.5
345,902 + 10210 mRNA_1842 0.46 -0.9
346,184 - 10210 mRNA_1842 0.57 -0.1
346,774 + 10210 mRNA_1842 0.82 0.6
346,782 - 10210 mRNA_1842 0.82 -1.0
346,910 - 10210 mRNA_1842 0.88 -0.1
346,921 + 10210 mRNA_1842 0.88 0.9
346,924 - 10210 mRNA_1842 0.88 -0.7
347,075 + -0.8
347,187 - -0.3
347,214 + -1.3
347,335 + -0.6
347,346 - -4.2
347,361 - -0.6
347,363 - -1.0
347,365 + -0.9
347,371 - -1.2
347,401 - -1.0
347,515 + -2.4
347,525 + -0.0
347,529 - 1.6
347,676 - 0.6
347,794 - 0.7
347,806 + -0.3
347,832 + -0.2
347,836 + -0.1
347,949 - -0.8
347,955 + -0.7