Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1659

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1658: 10026 - K02893 RP-L23Ae, RPL23A large subunit ribosomal protein L23Ae, at 826831 to 828048 10026 mRNA_1659: 10027 - K08741 MSH5 DNA mismatch repair protein MSH5, at 828859 to 833266 10027 mRNA_1660: 10028 - Hypothetical Protein, at 833434 to 834294 10028

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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828,235 + -1.1
828,264 + 0.4
828,271 + -0.7
828,272 + -0.8
828,277 + 0.9
828,417 + -1.1
828,720 - 0.9
829,001 + -0.3
829,022 - -0.4
829,090 - -0.7
829,227 + 0.5
829,560 + 10027 mRNA_1659 0.16 1.0
830,296 + 10027 mRNA_1659 0.33 0.9
830,375 + 10027 mRNA_1659 0.34 0.0
830,598 + 10027 mRNA_1659 0.39 0.2
831,034 + 10027 mRNA_1659 0.49 -0.5
831,146 - 10027 mRNA_1659 0.52 0.5
831,607 - 10027 mRNA_1659 0.62 -0.2
831,720 - 10027 mRNA_1659 0.65 -1.0
831,741 + 10027 mRNA_1659 0.65 -1.1
831,901 + 10027 mRNA_1659 0.69 -1.6
831,997 + 10027 mRNA_1659 0.71 -0.1
832,044 + 10027 mRNA_1659 0.72 -0.9
832,063 + 10027 mRNA_1659 0.73 -0.3
832,165 + 10027 mRNA_1659 0.75 -0.5
832,287 + 10027 mRNA_1659 0.78 0.6
832,368 + 10027 mRNA_1659 0.80 -1.8
832,455 - 10027 mRNA_1659 0.82 0.5
832,595 + 10027 mRNA_1659 0.85 0.2
832,635 - 10027 mRNA_1659 0.86 -1.8
832,738 - 10027 mRNA_1659 0.88 0.2
832,785 + 10027 mRNA_1659 0.89 0.0
832,895 - -2.5
833,026 + 0.0
833,027 - 0.2
833,066 - -0.1
833,193 - -1.6
833,328 - -1.5
833,332 - -0.9
833,345 - -0.6
833,370 + 0.3
833,471 + -3.1
833,506 + -0.3
833,523 - 10028 mRNA_1660 0.10 -3.8
833,659 + 10028 mRNA_1660 0.26 -1.1
833,805 + 10028 mRNA_1660 0.43 -1.7
833,930 + 10028 mRNA_1660 0.58 -1.7
833,931 - 10028 mRNA_1660 0.58 -0.8