Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1478

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1477: 9845 - Hypothetical Protein, at 397872 to 399169 9845 mRNA_1478: 9846 - Hypothetical Protein, at 399796 to 400850 9846 mRNA_1479: 9847 - ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 401327 to 402379 9847

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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398,841 + 9845 mRNA_1477 0.75 -0.2
398,842 - 9845 mRNA_1477 0.75 -0.6
398,870 + 9845 mRNA_1477 0.77 -1.0
398,888 + 9845 mRNA_1477 0.78 0.9
398,962 + 9845 mRNA_1477 0.84 -1.7
398,989 + 9845 mRNA_1477 0.86 0.1
399,033 - 9845 mRNA_1477 0.89 -0.3
399,033 + 9845 mRNA_1477 0.89 -0.5
399,035 + 9845 mRNA_1477 0.90 -0.5
399,166 + -0.4
399,171 + -1.3
399,178 - 0.1
399,179 - 0.0
399,186 - 0.9
399,195 + -0.6
399,200 - -0.6
399,201 + 0.5
399,207 + -0.5
399,217 + 0.6
399,221 + -0.5
399,247 + -1.9
399,269 - -1.7
399,388 - -1.1
399,415 - -1.0
399,495 - -0.6
399,518 - -2.1
399,548 - -2.6
399,629 - -1.5
399,654 - 0.0
399,704 - 0.1
399,740 - -0.2
399,750 + 0.0
400,188 + 9846 mRNA_1478 0.37 0.8
400,225 - 9846 mRNA_1478 0.41 -1.0
400,237 - 9846 mRNA_1478 0.42 0.2
400,240 + 9846 mRNA_1478 0.42 -0.1
400,271 + 9846 mRNA_1478 0.45 0.4
401,066 - -0.1
401,075 + -1.6
401,213 - 0.1
401,220 + -1.0
401,474 - 9847 mRNA_1479 0.14 -0.2
401,597 + 9847 mRNA_1479 0.26 -0.1