Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1416

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1416: 9784 - BLAST amino-acid permease [Pseudozyma hubeiensis SY62], at 224768 to 225675 9784

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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223,795 - -0.3
223,807 - 1.9
223,914 - 0.6
223,931 - 0.7
223,944 + -1.0
223,946 + 0.1
223,947 - 0.2
223,956 - 1.2
223,959 + -1.7
223,960 - -0.2
223,965 + 0.0
223,971 - -1.0
223,976 + -0.1
223,979 - -0.6
223,981 + 0.6
223,985 + 1.6
223,992 + 0.1
224,005 + 0.3
224,015 + -0.7
224,015 + 0.5
224,022 + 1.4
224,028 + 1.2
224,029 - 0.1
224,030 + -1.1
224,039 + -1.9
224,042 - 0.7
224,043 + 0.2
224,045 - -0.5
224,047 + 0.3
224,050 + 0.5
224,062 + -0.3
224,076 - -0.4
224,090 + -1.8
224,188 - -0.8
224,195 + -2.4
224,196 - 1.6
224,216 + -0.3
224,221 - -0.3
224,229 + -0.1
224,257 + 0.3
224,280 - -0.1
224,297 - -0.8
224,301 + 2.2
224,303 + -1.0
224,303 + -1.4
224,311 - -0.9
224,321 - -2.3
224,422 - -1.3
224,454 + 0.7
224,464 - -0.7
224,515 + -0.1
224,516 - -2.3
224,518 + -3.5
224,519 + 0.2
224,519 + -1.3
224,521 + 0.5
224,523 + -0.7
224,533 - -2.3
224,535 + -1.2
224,537 + 0.4
224,537 - 0.6
224,538 + 0.3
224,538 - -0.2
224,554 + -1.2
224,555 + 0.1
224,555 + -1.8
224,561 - -0.1
224,564 - -0.3
224,567 + 1.7
224,575 - -2.2
224,575 - -0.0
224,577 - -1.2
224,594 + 0.1
224,620 - 2.9
224,688 - -1.7
224,708 - -0.1
224,713 - -1.2
224,714 - -3.3
224,724 - -0.8
224,736 + 0.4
224,853 + -2.3
224,859 - 9784 mRNA_1416 0.10 0.3
224,869 + 9784 mRNA_1416 0.11 1.6
224,880 - 9784 mRNA_1416 0.12 -0.6
225,026 - 9784 mRNA_1416 0.28 -0.1
225,038 + 9784 mRNA_1416 0.30 -0.6
225,300 + 9784 mRNA_1416 0.59 0.6
226,160 + -0.8
226,185 + -2.3
226,189 - 0.3
226,307 - -0.6