Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1300

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1299: 9667 - K00600 glyA, SHMT glycine hydroxymethyltransferase, at 860509 to 862713 9667 mRNA_1300: 9668 - BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy..., at 862697 to 864122 9668 mRNA_1301: 9669 - K06947 GRC3, NOL9 polynucleotide 5'-hydroxyl-kinase GRC3/NOL9, at 864928 to 866257 9669

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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862,352 + 9667 mRNA_1299 0.84 -5.7
862,677 - -4.4
862,783 - 0.2
862,789 - -0.7
862,790 + -0.1
862,792 + -1.4
862,792 - -1.2
862,794 - -1.7
862,805 + -1.3
862,807 + 0.3
862,811 + -0.3
862,811 + 0.2
862,813 - 0.5
862,814 - -1.0
862,814 - -2.7
862,816 + 0.3
862,820 - -1.4
862,821 + -0.6
862,823 + -2.0
862,827 - -0.0
862,830 + -1.8
862,840 - 9668 mRNA_1300 0.10 -1.4
862,848 - 9668 mRNA_1300 0.11 -0.6
862,851 - 9668 mRNA_1300 0.11 -3.0
863,321 + 9668 mRNA_1300 0.44 -1.1