Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1222

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1221: 9589 - K01810 GPI, pgi glucose-6-phosphate isomerase, at 679841 to 682126 9589 mRNA_1222: 9590 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 682421 to 686506 9590 mRNA_1223: 9591 - PRINTS-Proline rich extensin signature-PR01217, at 687384 to 689890 9591

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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682,145 + -0.7
682,446 + -0.3
682,646 + 0.4
682,646 - 0.6
683,192 + 9590 mRNA_1222 0.19 -1.8
683,418 + 9590 mRNA_1222 0.24 -0.9
683,461 - 9590 mRNA_1222 0.25 1.3
683,470 - 9590 mRNA_1222 0.26 0.5
683,563 - 9590 mRNA_1222 0.28 -2.0
683,586 - 9590 mRNA_1222 0.29 -1.3
683,599 + 9590 mRNA_1222 0.29 -0.2
683,719 - 9590 mRNA_1222 0.32 -1.5
683,891 - 9590 mRNA_1222 0.36 0.6
683,992 + 9590 mRNA_1222 0.38 1.2
684,002 - 9590 mRNA_1222 0.39 -0.1
684,713 + 9590 mRNA_1222 0.56 -0.2
684,819 - 9590 mRNA_1222 0.59 -1.2
685,003 + 9590 mRNA_1222 0.63 0.6
685,052 - 9590 mRNA_1222 0.64 -0.4
685,272 + 9590 mRNA_1222 0.70 1.4
685,604 + 9590 mRNA_1222 0.78 0.4
685,708 + 9590 mRNA_1222 0.80 2.0
685,864 + 9590 mRNA_1222 0.84 -0.8
685,905 - 9590 mRNA_1222 0.85 -0.2
686,167 + 0.8
686,169 - -1.6
686,211 - 0.6
686,294 - -0.5
686,610 - 0.4
686,681 - -1.0
686,734 + -0.1
686,767 + -0.4
686,790 + -0.2
686,826 - -2.2
686,843 - -0.7
686,880 - -1.2
686,885 - 1.4
686,887 - 2.2
686,889 + -0.2
686,900 + -0.3
686,917 + -0.7
686,923 + -0.5
686,954 + 1.3
686,964 - 0.6
686,988 - 0.5
686,988 - 0.2
687,015 - 0.1
687,018 + -1.7
687,029 + -0.6
687,033 + 0.1
687,043 - -0.1
687,046 + -2.3
687,052 + -1.3
687,061 + -0.8
687,064 - 0.2
687,186 - -0.2
687,192 - -0.6
687,214 + 0.8
687,363 + -1.3
687,497 + -0.4