Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1141

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1140: 9508 - Hypothetical Protein, at 501144 to 502364 9508 mRNA_1141: 9509 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 502606 to 503454 9509 mRNA_1142: 9510 - K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta, at 503587 to 505304 9510

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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501,645 + 9508 mRNA_1140 0.41 -1.0
501,657 - 9508 mRNA_1140 0.42 -1.1
501,665 + 9508 mRNA_1140 0.43 -2.1
501,711 - 9508 mRNA_1140 0.46 0.2
501,725 + 9508 mRNA_1140 0.48 0.2
501,819 + 9508 mRNA_1140 0.55 -0.6
501,830 - 9508 mRNA_1140 0.56 -0.3
501,948 - 9508 mRNA_1140 0.66 -1.2
501,979 - 9508 mRNA_1140 0.68 -0.6
501,980 - 9508 mRNA_1140 0.68 0.3
502,126 + 9508 mRNA_1140 0.80 -1.2
502,134 - 9508 mRNA_1140 0.81 -2.6
502,139 + 9508 mRNA_1140 0.81 -2.2
502,238 - 9508 mRNA_1140 0.90 -1.5
502,239 - 9508 mRNA_1140 0.90 -0.4
502,243 - -0.5
502,398 + 0.5
502,400 - -0.4
502,407 + -1.3
502,420 - -0.3
502,424 + -0.2
502,424 + -1.1
502,425 - -0.2
502,431 + -0.0
502,435 - -1.4
502,440 + -0.3
502,446 + -2.0
502,726 - 9509 mRNA_1141 0.14 -0.0
503,043 + 9509 mRNA_1141 0.51 -1.1
503,286 - 9509 mRNA_1141 0.80 -0.7
503,429 - -1.2
504,146 + 9510 mRNA_1142 0.33 -1.2